RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 ATP2A3Q93084 1043 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 CLDN23Q96B33 292 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 FAM122AQ96E09 287 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 KLF16Q9BXK1 252 aaPredicted RBP13.81□□□□□ -0.2
SSB-203ENST00000413002 OSBPL6Q9BZF3 934 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 MIS12Q9H081 205 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 KCNH6Q9H252 994 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 CYLDQ9NQC7 956 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 RASAL2Q9UJF2 1139 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 SH3BP1Q9Y3L3 701 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
SSB-203ENST00000413002 ANTXRLA6NF34 631 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 YJEFN3A6XGL0 299 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 E7ENQ6 273 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 NCAM2O15394 837 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 CYP17A1P05093 508 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 HOXC13P31276 330 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 MLLT6P55198 1093 aaPredicted RBP13.8□□□□□ -0.2
SSB-203ENST00000413002 RAPGEF1Q13905 1077 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 GAS6Q14393 721 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 PM20D1Q6GTS8 502 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 FSTL4Q6MZW2 842 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 TSSK4Q6SA08 328 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 RSRC2Q7L4I2 434 aaKnown RBP13.8□□□□□ -0.2
SSB-203ENST00000413002 ENOSF1Q7L5Y1 443 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 C1orf210Q8IVY1 113 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 MAML2Q8IZL2 1156 aaPredicted RBP13.8□□□□□ -0.2
SSB-203ENST00000413002 SHC3Q92529 594 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 PRRX2Q99811 253 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 HSD3B7Q9H2F3 369 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 ST7Q9NRC1 585 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 DNMT3LQ9UJW3 386 aa13.8□□□□□ -0.2
SSB-203ENST00000413002 CACNA1HO95180 2353 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 PATJQ8NI35 1801 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 E2F8A0AVK6 867 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 SYCE3A1L190 88 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 NFATC1O95644 943 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 EGFP01133 1207 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 RALAP11233 206 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 ATP1A3P13637 1013 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 CDK11BP21127 795 aaKnown RBP13.79□□□□□ -0.2
SSB-203ENST00000413002 PLA2G5P39877 138 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 GPD2P43304 727 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 SLC6A11P48066 632 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 PSEN1P49768 467 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 NUBP1P53384 320 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
SSB-203ENST00000413002 DRAP1Q14919 205 aaPredicted RBP13.79□□□□□ -0.2
SSB-203ENST00000413002 DHCR24Q15392 516 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 STILQ15468 1287 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 GAB4Q2WGN9 574 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 LY6G5CQ5SRR4 150 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 KLHDC7AQ5VTJ3 777 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 BTBD8Q5XKL5 378 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 PKN3Q6P5Z2 889 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 RHBDF2Q6PJF5 856 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 DDX42Q86XP3 938 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSB-203ENST00000413002 PASD1Q8IV76 773 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 SCUBE3Q8IX30 993 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 KCTD13Q8WZ19 329 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 MSANTD3Q96H12 275 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 P2RY13Q9BPV8 354 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 PLCB1Q9NQ66 1216 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
SSB-203ENST00000413002 C2orf42Q9NWW7 574 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 CLIC5Q9NZA1 410 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 CYTH4Q9UIA0 394 aa13.79□□□□□ -0.2
SSB-203ENST00000413002 ARIH1Q9Y4X5 557 aaPredicted RBP13.79□□□□□ -0.2
SSB-203ENST00000413002 KIF26AQ9ULI4 1882 aaPredicted RBP13.78□□□□□ -0.2
SSB-203ENST00000413002 MYO16Q9Y6X6 1858 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 SLC12A8A0AV02 714 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 TRDMT1O14717 391 aaKnown RBP13.78□□□□□ -0.2
SSB-203ENST00000413002 EPHB6O15197 1021 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 LAMTOR5O43504 91 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 GREM1O60565 184 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 CLCN1P35523 988 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 OPRD1P41143 372 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 RPS9P46781 194 aaKnown RBP13.78□□□□□ -0.2
SSB-203ENST00000413002 DAOAP59103 153 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 CSTF1Q05048 431 aaKnown RBP13.78□□□□□ -0.2
SSB-203ENST00000413002 MESP2Q0VG99 397 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 NR1H3Q13133 447 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 CCINQ13939 588 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 TMEM196Q5HYL7 178 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 BSPRYQ5W0U4 402 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 SLC47A2Q86VL8 602 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 C12orf40Q86WS4 652 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 TMEM25Q86YD3 366 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 SFTPA1Q8IWL2 248 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 NAT16Q8N8M0 369 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 EZH1Q92800 747 aaPredicted RBP13.78□□□□□ -0.2
SSB-203ENST00000413002 CHRDQ9H2X0 955 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 FAM207AQ9NSI2 230 aaPredicted RBP13.78□□□□□ -0.2
SSB-203ENST00000413002 MARCH2Q9P0N8 246 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 TJP2Q9UDY2 1190 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 SFMBT1Q9UHJ3 866 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 R4GN57 208 aa13.78□□□□□ -0.2
SSB-203ENST00000413002 SLC9A3R1O14745 358 aaPredicted RBP13.77□□□□□ -0.21
SSB-203ENST00000413002 MED7O43513 233 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 STC2O76061 302 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms