RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 hCG_1818297A0A087WSY0 165 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 YJEFN3A6XGL0 299 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 E7ENQ6 273 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 TBC1D4O60343 1298 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 HEXIM1O94992 359 aaKnown RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 GJB5O95377 273 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 EFEMP2O95967 443 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 RARAP10276 462 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 NCAM1P13591 858 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 KDELR1P24390 212 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 IL1R2P27930 398 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 RDXP35241 583 aaKnown RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 HDAC4P56524 1084 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 RPL10AP62906 217 aaKnown RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 DHX34Q14147 1143 aaKnown RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 BRD3Q15059 726 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 PDK2Q15119 407 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 MGAT5BQ3V5L5 792 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 TMEM240Q5SV17 173 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 SH3PXD2AQ5TCZ1 1133 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 KAZNQ674X7 775 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 HFE2Q6ZVN8 426 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 MAP7D3Q8IWC1 876 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 NUP93Q8N1F7 819 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 C12orf50Q8NA57 414 aaPredicted RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 RAPGEF5Q92565 580 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 CENPIQ92674 756 aaPredicted RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 ACSF2Q96CM8 615 aaPredicted RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 GUCD1Q96NT3 240 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 PEBP4Q96S96 227 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 NPY6RQ99463 290 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 SEPT5Q99719 369 aaPredicted RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 C11orf84Q9BUA3 381 aaPredicted RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 SNRNP25Q9BV90 132 aaKnown RBP12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 FBXO44Q9H4M3 255 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 CHST7Q9NS84 486 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 STIM2Q9P246 746 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 EFR3BQ9Y2G0 817 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 INSL6Q9Y581 213 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 USP3Q9Y6I4 520 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 SLC4A7Q9Y6M7 1214 aa12.12□□□□□ -0.47
SNRNP35-202ENST00000412157 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 M0QYT0 321 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 C2CD2LO14523 706 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 MDM4O15151 490 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 RAD51CO43502 376 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 RTN3O95197 1032 aaPredicted RBP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 HAPLN1P10915 354 aaPredicted RBP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 CDKN2BP42772 138 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 FNTAP49354 379 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 CDH6P55285 790 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 HTRA4P83105 476 aaPredicted RBP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 DR1Q01658 176 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 ROR1Q01973 937 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 DSG1Q02413 1049 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 CREMQ03060 361 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 KRT17Q04695 432 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 LLGL1Q15334 1064 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 CYP1B1Q16678 543 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 MAP9Q49MG5 647 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 KCNT1Q5JUK3 1230 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 ERMARDQ5T6L9 678 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 BTBD8Q5XKL5 378 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 SLC8B1Q6J4K2 584 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 WDR93Q6P2C0 686 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 CCDC137Q6PK04 289 aaKnown RBP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 RNF19BQ6ZMZ0 732 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 SND1Q7KZF4 910 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 C16orf59Q7L2K0 433 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 BEND5Q7L4P6 421 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 DDX53Q86TM3 631 aaKnown RBP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 RFX6Q8HWS3 928 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 ARHGAP18Q8N392 663 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 PRELID2Q8N945 189 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 ATAD1Q8NBU5 361 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 CMASQ8NFW8 434 aaPredicted RBP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 SLC7A14Q8TBB6 771 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 HERVK_113Q902F9 699 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 PNKPQ96T60 521 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 VN1R3Q9BXE9 311 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 HEMGNQ9BXL5 484 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 CALN1Q9BXU9 219 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 FAM204AQ9H8W3 233 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 ABCC13Q9NSE7 274 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 COMMD8Q9NX08 183 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 RAB21Q9UL25 225 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 NAALADL1Q9UQQ1 740 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 SSX2IPQ9Y2D8 614 aa12.11□□□□□ -0.47
SNRNP35-202ENST00000412157 SYNJ2BP-COX16A0A087WUM0 186 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 TCRBV7S2A1N4TA0A589 114 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 WDR27A2RRH5 827 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 CCDC151A5D8V7 595 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 TNFRSF10BO14763 440 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms