RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 GREM1O60565 184 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 BEST1O76090 585 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 CLSTN1O94985 981 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 YEATS4O95619 227 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 TBX18O95935 607 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 C4BPAP04003 597 aaKnown RBP9.63□□□□□ -0.87
MRPL48-204ENST00000411840 CFIP05156 583 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 IRF1P10914 325 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 NTSR1P30989 418 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 HOXD12P35452 270 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 ATXN3P54252 364 aaPredicted RBP9.63□□□□□ -0.87
MRPL48-204ENST00000411840 GFPT1Q06210 699 aaPredicted RBP9.63□□□□□ -0.87
MRPL48-204ENST00000411840 SEMA3BQ13214 749 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 NCOA4Q13772 614 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 DUOXA1Q1HG43 343 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 ZNF667Q5HYK9 610 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 PEAR1Q5VY43 1037 aaPredicted RBP9.63□□□□□ -0.87
MRPL48-204ENST00000411840 SDE2Q6IQ49 451 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 SLC36A4Q6YBV0 504 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 SCARA5Q6ZMJ2 495 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 HTR3DQ70Z44 454 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 PIP4P1Q86T03 277 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 MIB1Q86YT6 1006 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 TERB1Q8NA31 727 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 CEP76Q8TAP6 659 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 GOLGA5Q8TBA6 731 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 SLC2A14Q8TDB8 520 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 PARD3BQ8TEW8 1205 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 SMARCD1Q96GM5 515 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 SMOQ99835 787 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 GTPBP2Q9BX10 602 aaKnown RBP9.63□□□□□ -0.87
MRPL48-204ENST00000411840 MAGEF1Q9HAY2 307 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 CSNK1G1Q9HCP0 422 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 FSCN3Q9NQT6 498 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 CALCOCO1Q9P1Z2 691 aa9.63□□□□□ -0.87
MRPL48-204ENST00000411840 DSPP15924 2871 aaKnown RBP9.63□□□□□ -0.87
MRPL48-204ENST00000411840 SPAARA0A1B0GVQ0 90 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 TMEM8BA6NDV4 472 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 UPK3BL1B0FP48 263 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 UPK3BL2E5RIL1 263 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 ZBTB24O43167 697 aaPredicted RBP9.62□□□□□ -0.87
MRPL48-204ENST00000411840 TLR5O60602 858 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 VNN1O95497 513 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 SERPINF2P08697 491 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 P4HA1P13674 534 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 CCDC130P13994 396 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 HOXB2P14652 356 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 ATP5C1P36542 298 aaKnown RBP9.62□□□□□ -0.87
MRPL48-204ENST00000411840 AFMP43652 599 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 NDST1P52848 882 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 MAP3K7CLP57077 242 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 DLG4P78352 724 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 SIM1P81133 766 aaPredicted RBP9.62□□□□□ -0.87
MRPL48-204ENST00000411840 ZNF33AQ06730 810 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 ORC1Q13415 861 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 CUL4BQ13620 913 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 SGSM1Q2NKQ1 1148 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 GRAMD4Q6IC98 578 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 KIAA1211LQ6NV74 962 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 CHPFQ8IZ52 775 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 CRYBG2Q8N1P7 616 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 C12orf29Q8N999 325 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 ZMIZ2Q8NF64 920 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 GATA6Q92908 595 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 ACOX2Q99424 681 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 BBS2Q9BXC9 721 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 KLF16Q9BXK1 252 aaPredicted RBP9.62□□□□□ -0.87
MRPL48-204ENST00000411840 FBXO44Q9H4M3 255 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 TLR8Q9NR97 1041 aaKnown RBP9.62□□□□□ -0.87
MRPL48-204ENST00000411840 KRT82Q9NSB4 513 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 DNAJC17Q9NVM6 304 aaKnown RBP9.62□□□□□ -0.87
MRPL48-204ENST00000411840 DMAC2Q9NW81 257 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 WDR35Q9P2L0 1181 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 NEUROG3Q9Y4Z2 214 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 CACNA1BQ00975 2339 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 MAP1BP46821 2468 aaKnown RBP9.62□□□□□ -0.87
MRPL48-204ENST00000411840 OBSL1O75147 1896 aa9.62□□□□□ -0.87
MRPL48-204ENST00000411840 TPRP12270 2363 aaKnown RBP9.61□□□□□ -0.87
MRPL48-204ENST00000411840 GREB1Q4ZG55 1949 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 IGHV1OR15-9A0A0B4J2B8 117 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 SRRM3A6NNA2 597 aaPredicted RBP9.61□□□□□ -0.87
MRPL48-204ENST00000411840 PRRT4C9JH25 899 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 NEDD8-MDP1E9PL57 170 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 HYAL3O43820 417 aaPredicted RBP9.61□□□□□ -0.87
MRPL48-204ENST00000411840 CACNG3O60359 315 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 ZNF217O75362 1048 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 RPN1P04843 607 aaKnown RBP9.61□□□□□ -0.87
MRPL48-204ENST00000411840 TYRP14679 529 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 NDUFV2P19404 249 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 STK4Q13043 487 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 FOXD4L6Q3SYB3 417 aaPredicted RBP9.61□□□□□ -0.87
MRPL48-204ENST00000411840 EGFLAMQ63HQ2 1017 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 FOXD4L3Q6VB84 417 aaPredicted RBP9.61□□□□□ -0.87
MRPL48-204ENST00000411840 TPGS1Q6ZTW0 290 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 RABEPKQ7Z6M1 372 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 UNC93AQ86WB7 457 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 SLC9A9Q8IVB4 645 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 GRAMD1CQ8IYS0 662 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 HDDC3Q8N4P3 179 aa9.61□□□□□ -0.87
MRPL48-204ENST00000411840 IPO4Q8TEX9 1081 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms