RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 EDN3P14138 238 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 PTPN9P43378 593 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 FHITP49789 147 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 PDE1AP54750 535 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 PPP1R15BQ5SWA1 713 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 MARK2Q7KZI7 788 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 TIPARPQ7Z3E1 657 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 CCDC117Q8IWD4 279 aaPredicted RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 MIER2Q8N344 545 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 ZNF540Q8NDQ6 660 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 SRCIN1Q9C0H9 1055 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 QRSL1Q9H0R6 528 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 EPS8L2Q9H6S3 715 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 CPA4Q9UI42 421 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 BAG5Q9UL15 447 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 PCYT1BQ9Y5K3 369 aaPredicted RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 CCNB3Q8WWL7 1395 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 FAM95CA0A1B0GW59 222 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 RHPN2P1A8MT19 583 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 PDE2AO00408 941 aaPredicted RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 OIP5O43482 229 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 RTN2O75298 545 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 GALP22466 123 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 SERPINF1P36955 418 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 MLLT6P55198 1093 aaPredicted RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 EIF3BP55884 814 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 TSPAN5P62079 268 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 MPP2Q14168 576 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 TMEM132BQ14DG7 1078 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 EZH2Q15910 746 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 MCMDC2Q4G0Z9 681 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 GPAT3Q53EU6 434 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 TIGD3Q6B0B8 471 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 PDE12Q6L8Q7 609 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 FOXR2Q6PJQ5 311 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 NLRP10Q86W26 655 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 NPAS4Q8IUM7 802 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 NECAB1Q8N987 351 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 WDSUB1Q8N9V3 476 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 DTD1Q8TEA8 209 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 ZNF473Q8WTR7 871 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 FAM111AQ96PZ2 611 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 CDK5RAP1Q96SZ6 601 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 C17orf80Q9BSJ5 609 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 WDR12Q9GZL7 423 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 ADAM19Q9H013 955 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 EHD4Q9H223 541 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 TOR3AQ9H497 397 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 DDX19AQ9NUU7 478 aaKnown RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 GRID1Q9ULK0 1009 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 PCDHGA10Q9Y5H3 936 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 MAFBQ9Y5Q3 323 aaPredicted RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 CFTRP13569 1480 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PDZK1P1A8MUH7 402 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PRR23D1E9PI22 279 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 L7N2F9 121 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 M0R036 132 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PSMD12O00232 456 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 EFCAB14O75071 495 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 KCNK5O95279 499 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TPBGLP0DKB5 382 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PRR23D2P0DMB1 279 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ITGA2P17301 1181 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 NPR3P17342 541 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PTPN1P18031 435 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CALB2P22676 271 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CFL1P23528 166 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 HOXD10P28358 340 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 MAP3K8P41279 467 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TSPAN7P41732 249 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 GSSP48637 474 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 VAMP2P63027 116 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 DLG4P78352 724 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 RAD51Q06609 339 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 MCL1Q07820 350 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 COL9A2Q14055 689 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 RNASEH2BQ5TBB1 312 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TPGS1Q6ZTW0 290 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TAS1R3Q7RTX0 852 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 METTL3Q86U44 580 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PALB2Q86YC2 1186 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CDH26Q8IXH8 852 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SLC35F3Q8IY50 421 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 THNSL1Q8IYQ7 743 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SLAIN1Q8ND83 568 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 LPCAT1Q8NF37 534 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 IPMKQ8NFU5 416 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 OR5J2Q8NH18 312 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 PRICKLE1Q96MT3 831 aaPredicted RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 TCF12Q99081 682 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 GMLQ99445 158 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 CHCHD6Q9BRQ6 235 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 NUDT9Q9BW91 350 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 HEMGNQ9BXL5 484 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SEMA4CQ9C0C4 833 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 RAB17Q9H0T7 212 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 ELOVL6Q9H5J4 265 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 NGRNQ9NPE2 291 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 SDHAF3Q9NRP4 125 aa5.39□□□□□ -1.55
R3HDM1-204ENST00000410054 KCNH7Q9NS40 1196 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms