RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ANKRD13AQ8IZ07 590 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 FAM13CQ8NE31 585 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 MRPL45Q9BRJ2 306 aaKnown RBP16.51■□□□□ 0.23
HOXD3-202ENST00000410016 SNRNP25Q9BV90 132 aaKnown RBP16.51■□□□□ 0.23
HOXD3-202ENST00000410016 TSSK1BQ9BXA7 367 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 FRMD8Q9BZ67 464 aaPredicted RBP16.51■□□□□ 0.23
HOXD3-202ENST00000410016 TLE6Q9H808 572 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 POPDC2Q9HBU9 364 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 NGRNQ9NPE2 291 aaKnown RBP16.51■□□□□ 0.23
HOXD3-202ENST00000410016 LNPEPQ9UIQ6 1025 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 ASB14A6NK59 587 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 CXorf49A8MYA2 514 aaPredicted RBP16.51■□□□□ 0.23
HOXD3-202ENST00000410016 APOL1O14791 398 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 PAPSS1O43252 624 aaPredicted RBP16.51■□□□□ 0.23
HOXD3-202ENST00000410016 MAP3K6O95382 1288 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 RASSF2P50749 326 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 CCNG1P51959 295 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 HDAC4P56524 1084 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 SLC6A3Q01959 620 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 FAXCQ5TGI0 409 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 MTHFD1LQ6UB35 978 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 CDHR3Q6ZTQ4 885 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 LRRN4Q8WUT4 740 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 KIF12Q96FN5 646 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 TBCBQ99426 244 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 C16orf70Q9BSU1 422 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 ADARB2Q9NS39 739 aaKnown RBP16.51■□□□□ 0.23
HOXD3-202ENST00000410016 CFAP69A5D8W1 941 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 MDM4O15151 490 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 DIAPH2O60879 1101 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 TGDSO95455 350 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 DLDP09622 509 aaKnown RBP16.5■□□□□ 0.23
HOXD3-202ENST00000410016 PRKCHP24723 683 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 ACOT1Q86TX2 421 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 AFG1LQ8WV93 481 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 B3GNT5Q9BYG0 378 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 TRIM55Q9BYV6 548 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 ETNK2Q9NVF9 386 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 ZNF180Q9UJW8 692 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 PPEF2O14830 753 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 TFE3P19532 575 aaPredicted RBP16.5■□□□□ 0.23
HOXD3-202ENST00000410016 PTPN4P29074 926 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 EPHB2P29323 1055 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 SDC4P31431 198 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 MAGEA3P43357 314 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 LONP2Q86WA8 852 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 PPTC7Q8NI37 304 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 NLRP7Q8WX94 980 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 CFAP36Q96G28 342 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 ZMAT2Q96NC0 199 aaKnown RBP16.5■□□□□ 0.23
HOXD3-202ENST00000410016 ZNF670Q9BS34 389 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 SMYD2Q9NRG4 433 aa16.5■□□□□ 0.23
HOXD3-202ENST00000410016 NKX1-2Q9UD57 310 aaPredicted RBP16.5■□□□□ 0.23
HOXD3-202ENST00000410016 ZC3H7BQ9UGR2 993 aaKnown RBP16.5■□□□□ 0.23
HOXD3-202ENST00000410016 A0A0G2JND7 137 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 SLC15A5A6NIM6 579 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 TRDMT1O14717 391 aaKnown RBP16.49■□□□□ 0.23
HOXD3-202ENST00000410016 ZBED1O96006 694 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 IL1BP01584 269 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 APRTP07741 180 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 ZNF286BP0CG31 522 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 GRM5P41594 1212 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 PPIL2Q13356 520 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 MARCH8Q5T0T0 291 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 TTC39BQ5VTQ0 682 aaPredicted RBP16.49■□□□□ 0.23
HOXD3-202ENST00000410016 PPM1NQ8N819 430 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 CCDC110Q8TBZ0 833 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 C11orf84Q9BUA3 381 aaPredicted RBP16.49■□□□□ 0.23
HOXD3-202ENST00000410016 HEY2Q9UBP5 337 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 ZNF487B1APH4 448 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 TRIM49D1C9J1S8 452 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 PEX11AO75192 247 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 BGNP21810 368 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 OSBPP22059 807 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 SERPINB4P48594 390 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 SLC10A2Q12908 348 aaPredicted RBP16.49■□□□□ 0.23
HOXD3-202ENST00000410016 ZNF534Q76KX8 674 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 MCUQ8NE86 351 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 TTC17Q96AE7 1141 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 SRPK1Q96SB4 655 aaKnown RBP16.49■□□□□ 0.23
HOXD3-202ENST00000410016 MIPEPQ99797 713 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 KLC2Q9H0B6 622 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 NRDE2Q9H7Z3 1164 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 FAM49BQ9NUQ9 324 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 SNX9Q9Y5X1 595 aa16.49■□□□□ 0.23
HOXD3-202ENST00000410016 KLF11O14901 512 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 DNAJC6O75061 913 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 METTL18O95568 372 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 ZBTB6Q15916 424 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 STK32AQ8WU08 396 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 SKA1Q96BD8 255 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 ZNF570Q96NI8 536 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 MAGEB5Q9BZ81 275 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 RNPEPL1Q9HAU8 725 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 COL1A2P08123 1366 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 RFPL1O75677 317 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 SNRPAP09012 282 aaKnown RBP16.48■□□□□ 0.23
HOXD3-202ENST00000410016 SETSIPP0DME0 302 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 GNAZP19086 355 aa16.48■□□□□ 0.23
HOXD3-202ENST00000410016 HOXA11P31270 313 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms