RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 DUPD1Q68J44 220 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 VSTM1Q6UX27 236 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 HFE2Q6ZVN8 426 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 BBS12Q6ZW61 710 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 JAMLQ86YT9 394 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 SPATA2LQ8IUW3 424 aaPredicted RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 PSTKQ8IV42 348 aaKnown RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 TMEM199Q8N511 208 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 CAVIN3Q969G5 261 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 MAGOHBQ96A72 148 aaKnown RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 C8orf48Q96LL4 319 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 VN1R3Q9BXE9 311 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 FRMD8P1Q9BZ68 369 aaPredicted RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 RAB17Q9H0T7 212 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 EPB41L5Q9HCM4 733 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 FAM53CQ9NYF3 392 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 RRN3Q9NYV6 651 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 PCSK1NQ9UHG2 260 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 MTCL1Q9Y4B5 1905 aaKnown RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 CARNS1A5YM72 827 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 YJEFN3A6XGL0 299 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 E7ENQ6 273 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 H7C4K7 107 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 MAP2K7O14733 419 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 VNN2O95498 520 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 LTFP02788 710 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 CD48P09326 243 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 OR4Q2P0C623 313 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 KRT10P13645 584 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 RABGGTBP53611 331 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 EPHB4P54760 987 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 DEFB103AP81534 67 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 GPR17Q13304 367 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 NNTQ13423 1086 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 EIF4EBP2Q13542 120 aaPredicted RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 DPYSL3Q14195 570 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 DPYSL2Q16555 572 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 CDO1Q16878 200 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 CTXN3Q4LDR2 81 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 KCNT1Q5JUK3 1230 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 RTP2Q5QGT7 225 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 SYDE1Q6ZW31 735 aaPredicted RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 ANKS3Q6ZW76 656 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 C2orf15Q8WU43 125 aaKnown RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 NDRG1Q92597 394 aaKnown RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 ACSF2Q96CM8 615 aaPredicted RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 ERP44Q9BS26 406 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 SNRNP25Q9BV90 132 aaKnown RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 HEMGNQ9BXL5 484 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 FUT8Q9BYC5 575 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 NGRNQ9NPE2 291 aaKnown RBP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 IL23AQ9NPF7 189 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.76□□□□□ -1.49
EPHA4-202ENST00000409854 IL37Q9NZH6 218 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 STAP1Q9ULZ2 295 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 DOCK4Q8N1I0 1966 aa5.76□□□□□ -1.49
EPHA4-202ENST00000409854 TRIM66O15016 1216 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 LIASO43766 372 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 IGLV3-25P01717 112 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 USP17L7P0C7H9 530 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 RAG1P15918 1043 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 IL4RP24394 825 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 CYP2F1P24903 491 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 CARSP49589 748 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SULT1E1P49888 294 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 AIF1P55008 147 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 PTK6Q13882 451 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ERMARDQ5T6L9 678 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SYPL2Q5VXT5 272 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 EMBQ6PCB8 327 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 RSPO2Q6UXX9 243 aaPredicted RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 GRK7Q8WTQ7 553 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 C1orf54Q8WWF1 131 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 NKD2Q969F2 451 aaPredicted RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 IGSF21Q96ID5 467 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SLC9A7Q96T83 725 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ZNF670Q9BS34 389 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 TRIM51Q9BSJ1 452 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 TTPALQ9BTX7 342 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 TRIM62Q9BVG3 475 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 PCDH18Q9HCL0 1135 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 FAM114A2Q9NRY5 505 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 MTMR10Q9NXD2 777 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 MTRRQ9UBK8 725 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 RASAL2Q9UJF2 1139 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 PCDHB5Q9Y5E4 795 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 BACE2Q9Y5Z0 518 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ATG2AQ2TAZ0 1938 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 ESYT3A0FGR9 886 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 FAM92AA1XBS5 289 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 MTMR11A4FU01 709 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 RDXP35241 583 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 PBX3P40426 434 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SLC5A3P53794 718 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 PITX1P78337 314 aaPredicted RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SCAPQ12770 1279 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 MTA1Q13330 715 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 OASLQ15646 514 aaKnown RBP5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SLC9A4Q6AI14 798 aa5.75□□□□□ -1.49
EPHA4-202ENST00000409854 SLC8B1Q6J4K2 584 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms