RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
CHMP3-205ENST00000409810 HEBP1Q9NRV9 189 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 OLA1Q9NTK5 396 aaKnown RBP11.45□□□□□ -0.58
CHMP3-205ENST00000409810 SMPD4Q9NXE4 827 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 TBC1D14Q9P2M4 693 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 LSM7Q9UK45 103 aaKnown RBP11.45□□□□□ -0.58
CHMP3-205ENST00000409810 STRIP2Q9ULQ0 834 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 HCN4Q9Y3Q4 1203 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 PIAS3Q9Y6X2 628 aa11.45□□□□□ -0.58
CHMP3-205ENST00000409810 A0A1B0GTH6 734 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 A0A1W2PQC6 194 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 KANSL1LA0AUZ9 987 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 E2F8A0AVK6 867 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 NCAM2O15394 837 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 NFATC1O95644 943 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 PDGFBP01127 241 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-205ENST00000409810 CCDC172P0C7W6 258 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 PNMA6AP0CW24 399 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-205ENST00000409810 CYP11B1P15538 503 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 CLCN1P35523 988 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 SOX5P35711 763 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 RPL34P49207 117 aaKnown RBP11.44□□□□□ -0.58
CHMP3-205ENST00000409810 DAOAP59103 153 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 NR1H3Q13133 447 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 RUNX3Q13761 415 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 CWF19L1Q69YN2 538 aaKnown RBP11.44□□□□□ -0.58
CHMP3-205ENST00000409810 DENND1BQ6P3S1 775 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 SCD5Q86SK9 330 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 RALGPS2Q86X27 583 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-205ENST00000409810 ZNF677Q86XU0 584 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 MSANTD4Q8NCY6 345 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 IPO4Q8TEX9 1081 aaKnown RBP11.44□□□□□ -0.58
CHMP3-205ENST00000409810 RNF139Q8WU17 664 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 NELL2Q99435 816 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 FAM83CQ9BQN1 747 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 DDX23Q9BUQ8 820 aaKnown RBP11.44□□□□□ -0.58
CHMP3-205ENST00000409810 EBF3Q9H4W6 596 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 ACP6Q9NPH0 428 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 NLRC4Q9NPP4 1024 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 GKN1Q9NS71 199 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 ABCC13Q9NSE7 274 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 OSER1Q9NX31 292 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 GTSE1Q9NYZ3 720 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 CFAP97Q9P2B7 532 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 RASAL2Q9UJF2 1139 aa11.44□□□□□ -0.58
CHMP3-205ENST00000409810 GFPT2O94808 682 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 TPM3P06753 285 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 IRF1P10914 325 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 AOC1P19801 751 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 MAGEA9P43362 315 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 NUBP1P53384 320 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 JAM2P57087 298 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 COG7P83436 770 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 FANCCQ00597 558 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 PDCLQ13371 301 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 UBXN2BQ14CS0 331 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 EML3Q32P44 896 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 TRIM68Q6AZZ1 485 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 PASD1Q8IV76 773 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 TMEM35BQ8NCS4 154 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 PJA1Q8NG27 643 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 RIN3Q8TB24 985 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 FAM3CQ92520 227 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 OTUB2Q96DC9 234 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 ZFRQ96KR1 1074 aaKnown RBP11.43□□□□□ -0.58
CHMP3-205ENST00000409810 PRRX2Q99811 253 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 SLC4A5Q9BY07 1137 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 OSBPL6Q9BZF3 934 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 MIS12Q9H081 205 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 SYNCQ9H7C4 482 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 LTB4R2Q9NPC1 389 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 HPS4Q9NQG7 708 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 SIT1Q9Y3P8 196 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 WNT6Q9Y6F9 365 aa11.43□□□□□ -0.58
CHMP3-205ENST00000409810 E5RJQ4 531 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 SPECC1L-ADORA2AF8WAN1 911 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 PIK3R2O00459 728 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 EPHB6O15197 1021 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 TEX33O43247 280 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 LSM8O95777 96 aaKnown RBP11.42□□□□□ -0.58
CHMP3-205ENST00000409810 TBX18O95935 607 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 LTFP02788 710 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 AVPR2P30518 371 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 CTHP32929 405 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 PGFP49763 221 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 UBASH3AP57075 661 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 ZXDBP98169 803 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 TNK2Q07912 1038 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 EFEMP1Q12805 493 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 BSPRYQ5W0U4 402 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 BHLHA9Q7RTU4 235 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 TMEM110Q86TL2 294 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 MIB1Q86YT6 1006 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 C1orf131Q8NDD1 294 aaKnown RBP11.42□□□□□ -0.58
CHMP3-205ENST00000409810 EPS8L1Q8TE68 723 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 FAM149B1Q96BN6 582 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 PPP1R13BQ96KQ4 1090 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 KLF16Q9BXK1 252 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-205ENST00000409810 DCLK3Q9C098 648 aa11.42□□□□□ -0.58
CHMP3-205ENST00000409810 ECT2Q9H8V3 914 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms