RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 BSPRYQ5W0U4 402 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 BMP8AQ7Z5Y6 402 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 SCUBE3Q8IX30 993 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 C1QTNF1Q9BXJ1 281 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 MIS12Q9H081 205 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 HPS4Q9NQG7 708 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 GKN1Q9NS71 199 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 THG1LQ9NWX6 298 aaKnown RBP23.46■■□□□ 1.35
PTCD3-203ENST00000409783 FBXL21Q9UKT6 434 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 CA14Q9ULX7 337 aa23.46■■□□□ 1.35
PTCD3-203ENST00000409783 GREM1O60565 184 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 PLCB2Q00722 1185 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 FMO1Q01740 532 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 CDR2Q01850 454 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 PTPN20Q4JDL3 420 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 SLC44A4Q53GD3 710 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 C10orf120Q5SQS8 335 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 IRF2BP2Q7Z5L9 587 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 SIX5Q8N196 739 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 KIAA1958Q8N8K9 716 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 PPP1R13BQ96KQ4 1090 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 EDEM3Q9BZQ6 932 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 ARHGEF3Q9NR81 526 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 HEBP1Q9NRV9 189 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 CFAP97Q9P2B7 532 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 DNMT3LQ9UJW3 386 aa23.45■■□□□ 1.34
PTCD3-203ENST00000409783 FYNP06241 537 aa23.44■■□□□ 1.34
PTCD3-203ENST00000409783 TNK2Q07912 1038 aa23.44■■□□□ 1.34
PTCD3-203ENST00000409783 BTBD8Q5XKL5 378 aa23.44■■□□□ 1.34
PTCD3-203ENST00000409783 TRIM68Q6AZZ1 485 aa23.44■■□□□ 1.34
PTCD3-203ENST00000409783 GAS2L3Q86XJ1 694 aa23.44■■□□□ 1.34
PTCD3-203ENST00000409783 DDX42Q86XP3 938 aaKnown RBP eCLIP23.44■■□□□ 1.34
PTCD3-203ENST00000409783 TMEM35BQ8NCS4 154 aa23.44■■□□□ 1.34
PTCD3-203ENST00000409783 OSCP1Q8WVF1 389 aa23.44■■□□□ 1.34
PTCD3-203ENST00000409783 CDK5RAP1Q96SZ6 601 aaKnown RBP23.44■■□□□ 1.34
PTCD3-203ENST00000409783 ABCC13Q9NSE7 274 aa23.44■■□□□ 1.34
PTCD3-203ENST00000409783 LRRC53A6NM62 1247 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 LSM8O95777 96 aaKnown RBP23.43■■□□□ 1.34
PTCD3-203ENST00000409783 LTFP02788 710 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 ERBB2P04626 1255 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 CYP1A1P04798 512 aaPredicted RBP23.43■■□□□ 1.34
PTCD3-203ENST00000409783 NOMO3P69849 1222 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 MLF2Q15773 248 aaPredicted RBP23.43■■□□□ 1.34
PTCD3-203ENST00000409783 EML3Q32P44 896 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 TMEM31Q5JXX7 168 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 E4F1Q66K89 784 aaPredicted RBP23.43■■□□□ 1.34
PTCD3-203ENST00000409783 TTC16Q8NEE8 873 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 OLIG1Q8TAK6 271 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 EDEM1Q92611 657 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 PIWIL1Q96J94 861 aaKnown RBP23.43■■□□□ 1.34
PTCD3-203ENST00000409783 PCDHB18PQ96TA0 734 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 SYT11Q9BT88 431 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 DDX23Q9BUQ8 820 aaKnown RBP23.43■■□□□ 1.34
PTCD3-203ENST00000409783 NACA2Q9H009 215 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 RBSNQ9H1K0 784 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 LINC00597Q9H2U6 94 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 GTSE1Q9NYZ3 720 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 WNT6Q9Y6F9 365 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 F5P12259 2224 aa23.43■■□□□ 1.34
PTCD3-203ENST00000409783 E2F8A0AVK6 867 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 OTOL1A6NHN0 477 aaPredicted RBP23.42■■□□□ 1.34
PTCD3-203ENST00000409783 PRR33A8MZF0 331 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 AP5Z1O43299 807 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 ARSAP15289 507 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 FERP16591 822 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 STARD6P59095 220 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 ARID5AQ03989 594 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 PRKCQQ04759 706 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 EFEMP1Q12805 493 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 PDGFRLQ15198 375 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 CC2D1AQ6P1N0 951 aaPredicted RBP23.42■■□□□ 1.34
PTCD3-203ENST00000409783 TADA2BQ86TJ2 420 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 NOX5Q96PH1 765 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 NUP58Q9BVL2 599 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 PDCL3Q9H2J4 239 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 EBF3Q9H4W6 596 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 DUS2Q9NX74 493 aaKnown RBP23.42■■□□□ 1.34
PTCD3-203ENST00000409783 AIPL1Q9NZN9 384 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 CEP83Q9Y592 693 aa23.42■■□□□ 1.34
PTCD3-203ENST00000409783 ITIH6Q6UXX5 1313 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 A0A1W2PQJ5 194 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 SCAMP3O14828 347 aaKnown RBP23.41■■□□□ 1.34
PTCD3-203ENST00000409783 SART1O43290 800 aaKnown RBP23.41■■□□□ 1.34
PTCD3-203ENST00000409783 GABRB2P47870 512 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 MLLT6P55198 1093 aaPredicted RBP23.41■■□□□ 1.34
PTCD3-203ENST00000409783 RUNX3Q13761 415 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 MSANTD2Q6P1R3 559 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 MIB1Q86YT6 1006 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 PBXIP1Q96AQ6 731 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 CHFRQ96EP1 664 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 LRFN3Q9BTN0 628 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 OLA1Q9NTK5 396 aaKnown RBP23.41■■□□□ 1.34
PTCD3-203ENST00000409783 MARCH2Q9P0N8 246 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 RASAL2Q9UJF2 1139 aa23.41■■□□□ 1.34
PTCD3-203ENST00000409783 IRF1P10914 325 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 IFNAR2P48551 515 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 TAF5Q15542 800 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 NAA35Q5VZE5 725 aa23.4■■□□□ 1.34
PTCD3-203ENST00000409783 CWF19L1Q69YN2 538 aaKnown RBP23.4■■□□□ 1.34
PTCD3-203ENST00000409783 OLFML1Q6UWY5 402 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms