RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PHBP35232 272 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 MARCKSL1P49006 195 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 ARPC4P59998 168 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 TFAP4Q01664 338 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 SLC18A2Q05940 514 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 MYBPC2Q14324 1141 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 TMEM132BQ14DG7 1078 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 MORF4L2Q15014 288 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 KLHL38Q2WGJ6 581 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 HERC4Q5GLZ8 1057 aaPredicted RBP11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 IZUMO3Q5VZ72 239 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 SMYD5Q6GMV2 418 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 DCLRE1AQ6PJP8 1040 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 PLEKHH3Q7Z736 793 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 ZNF444Q8N0Y2 327 aaPredicted RBP11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 TERB1Q8NA31 727 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 PNMA1Q8ND90 353 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 ADAMTS16Q8TE57 1224 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 OLFM1Q99784 485 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 MAK16Q9BXY0 300 aaKnown RBP11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 NMUR2Q9GZQ4 415 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 SPATC1LQ9H0A9 340 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 PARVBQ9HBI1 364 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 ZNF287Q9HBT7 754 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 NYAP2Q9P242 653 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 APEX2Q9UBZ4 518 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 ITGA11Q9UKX5 1188 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 STRIP2Q9ULQ0 834 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 ALPK3Q96L96 1907 aa11.04□□□□□ -0.64
NIF3L1-204ENST00000409357 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 SMCHD1A6NHR9 2005 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 PLXNA1Q9UIW2 1896 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 NPHP3-ACAD11A0A0J9YXS1 232 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 SMCO2A6NFE2 343 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 H3BRJ5 948 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 ATP2A1O14983 1001 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 PMM2O15305 246 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 CYTH3O43739 400 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 ADAM23O75077 832 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 AKAP3O75969 853 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 KLHL2O95198 593 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 FTLP02792 175 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 HMGCRP04035 888 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 NR3C1P04150 777 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 GJB1P08034 283 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 TSPY3P0CV98 308 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 TSPY8P0CW00 308 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 MYL2P10916 166 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 CYP2C9P11712 490 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 ADRA1DP25100 572 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 TCF7P36402 384 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 PIK3CAP42336 1068 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 UBXN2AP68543 259 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 CCNIQ14094 377 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 SPCS2Q15005 226 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 SLC35G1Q2M3R5 365 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 ZNF362Q5T0B9 420 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 SNRNP48Q6IEG0 339 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 ZFP1Q6P2D0 407 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 DCDC5Q6ZRR9 648 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 HEATR3Q7Z4Q2 680 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 NANOGNBQ7Z5D8 188 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 DNAAF5Q86Y56 855 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 CCDC33Q8N5R6 958 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 TTC13Q8NBP0 860 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 NEDD1Q8NHV4 660 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 HM13Q8TCT9 377 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 TMEM174Q8WUU8 243 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 PRPF31Q8WWY3 499 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 STARD8Q92502 1023 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 ATP6V0A1Q93050 837 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 DEFB118Q96PH6 123 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 NUDT12Q9BQG2 462 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 MRPL1Q9BYD6 325 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 TRPC7Q9HCX4 862 aa11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 PAK6Q9NQU5 681 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 FBXO6Q9NRD1 293 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-204ENST00000409357 UBE4BO95155 1302 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 GSTTP1A0A1W2PQM5 241 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 DNALI1O14645 258 aaPredicted RBP11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 EIF3DO15371 548 aaKnown RBP eCLIP11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 DKC1O60832 514 aaKnown RBP eCLIP11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 PLA2G4BP0C869 781 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 KRT4P19013 534 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 POLR2EP19388 210 aaKnown RBP11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 RRM1P23921 792 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 PMLP29590 882 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 TTKP33981 857 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 PSMC2P35998 433 aaKnown RBP11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 FMO5P49326 533 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 NAPAP54920 295 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 MCCD1P59942 119 aaPredicted RBP11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 NAA20P61599 178 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 MYBPC1Q00872 1141 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 KLF1Q13351 362 aaPredicted RBP11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 GRB14Q14449 540 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 MFSD4BQ5TF39 518 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 PPP1R18Q6NYC8 613 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 ELMSAN1Q6PJG2 1045 aa11.02□□□□□ -0.64
NIF3L1-204ENST00000409357 IQCF2Q8IXL9 164 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms