RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PRMT9Q6P2P2 845 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 BHLHE22Q8NFJ8 381 aaPredicted RBP18.21■□□□□ 0.51
SMPD4-202ENST00000409031 PLEKHG4BQ96PX9 1271 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 STMN3Q9NZ72 180 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 TAF4O00268 1085 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 LDLRP01130 860 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 FGFR2P21802 821 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 RGS7P49802 495 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 BFSP2Q13515 415 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 ACAP1Q15027 740 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 ZCCHC23Q6ZST2 131 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 CLEC10AQ8IUN9 316 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 TTYH3Q9C0H2 523 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 RIOX1Q9H6W3 641 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 ZNF556Q9HAH1 456 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 RAVER2Q9HCJ3 691 aaKnown RBP18.21■□□□□ 0.51
SMPD4-202ENST00000409031 DKK3Q9UBP4 350 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 TLR2O60603 784 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 S100A14Q9HCY8 104 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 LMTK3Q96Q04 1460 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 PNMA8CA0A1B0GUJ8 204 aa18.21■□□□□ 0.5
SMPD4-202ENST00000409031 CCDC78A2IDD5 438 aa18.21■□□□□ 0.5
SMPD4-202ENST00000409031 LZTS3O60299 673 aaPredicted RBP18.21■□□□□ 0.5
SMPD4-202ENST00000409031 GP5P40197 560 aa18.21■□□□□ 0.5
SMPD4-202ENST00000409031 DGKDQ16760 1214 aa18.21■□□□□ 0.5
SMPD4-202ENST00000409031 KYAT1Q16773 422 aa18.21■□□□□ 0.5
SMPD4-202ENST00000409031 ALG3Q92685 438 aa18.21■□□□□ 0.5
SMPD4-202ENST00000409031 EGFL8Q99944 293 aa18.21■□□□□ 0.5
SMPD4-202ENST00000409031 C17orf80Q9BSJ5 609 aa18.21■□□□□ 0.5
SMPD4-202ENST00000409031 SPDYE5A6NIY4 337 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 MAP3K13O43283 966 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 TPD52L2O43399 206 aaKnown RBP18.2■□□□□ 0.5
SMPD4-202ENST00000409031 GRAP2O75791 330 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 FKBP9O95302 570 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 GLRA4Q5JXX5 417 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 FKBP9P1Q75LS8 142 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 SV2AQ7L0J3 742 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 PQLC1Q8N2U9 271 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 SHCBP1Q8NEM2 672 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 MXRA8Q9BRK3 442 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 ACSS3Q9H6R3 686 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 RUVBL2Q9Y230 463 aaKnown RBP18.2■□□□□ 0.5
SMPD4-202ENST00000409031 ACOT9Q9Y305 439 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 HNRNPCL2B2RXH8 293 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 MAGEB2O15479 319 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 PEX1O43933 1283 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 SUPT7LO94864 414 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 GH1P01241 217 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 RAB15P59190 212 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 WASHC5Q12768 1159 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 TRIM25Q14258 630 aaKnown RBP18.2■□□□□ 0.5
SMPD4-202ENST00000409031 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMPD4-202ENST00000409031 RORBQ92753 470 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 WDR41Q9HAD4 459 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 STK39Q9UEW8 545 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 PSMD13Q9UNM6 376 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 COL15A1P39059 1388 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 ADORA2BP29275 332 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 LRRC8DQ7L1W4 858 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 LUZP2Q86TE4 346 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 NOP9Q86U38 636 aaKnown RBP18.2■□□□□ 0.5
SMPD4-202ENST00000409031 ZNF333Q96JL9 665 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 GCNT1Q02742 428 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 MFSD4BQ5TF39 518 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 STRA8Q7Z7C7 330 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 TTC7BQ86TV6 843 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 SULF1Q8IWU6 871 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 ADCY4Q8NFM4 1077 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 BTBD9Q96Q07 612 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 WRNIP1Q96S55 665 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 SPATA16Q9BXB7 569 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 TAS2R14Q9NYV8 317 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 PRPF19Q9UMS4 504 aaKnown RBP18.2■□□□□ 0.5
SMPD4-202ENST00000409031 AGAP1Q9UPQ3 857 aa18.2■□□□□ 0.5
SMPD4-202ENST00000409031 UPP2O95045 317 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 GARTP22102 1010 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 ACAT1P24752 427 aaKnown RBP18.19■□□□□ 0.5
SMPD4-202ENST00000409031 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.19■□□□□ 0.5
SMPD4-202ENST00000409031 DENND5BQ6ZUT9 1274 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 LINC00523Q86TU6 105 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 TAGAPQ8N103 731 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 SARS2Q9NP81 518 aaKnown RBP18.19■□□□□ 0.5
SMPD4-202ENST00000409031 SRP68Q9UHB9 627 aaKnown RBP18.19■□□□□ 0.5
SMPD4-202ENST00000409031 TNPO2O14787 897 aaKnown RBP18.19■□□□□ 0.5
SMPD4-202ENST00000409031 ZNF862O60290 1169 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 MPOP05164 745 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 SREBF1P36956 1147 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 PKNOX1P55347 436 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 NFYCQ13952 458 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 ARMC4Q5T2S8 1044 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 GSTCDQ8NEC7 633 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 CLK4Q9HAZ1 481 aaKnown RBP18.19■□□□□ 0.5
SMPD4-202ENST00000409031 MPP6Q9NZW5 540 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 NARFQ9UHQ1 456 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 SALL4Q9UJQ4 1053 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 H3BNX3 289 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 LCP1P13796 627 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 MARCKSL1P49006 195 aa18.19■□□□□ 0.5
SMPD4-202ENST00000409031 CNPY1Q3B7I2 92 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms