RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ANKRD52Q8NB46 1076 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 SLC4A11Q8NBS3 891 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 USP33Q8TEY7 942 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 WHAMMQ8TF30 809 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 NELFBQ8WX92 580 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 SEMA4DQ92854 862 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 ELMO3Q96BJ8 720 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 EEF2KMTQ96G04 330 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 ZFRQ96KR1 1074 aaKnown RBP9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 FAM81BQ96LP2 452 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 POLMQ9NP87 494 aaPredicted RBP9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 SPHK2Q9NRA0 654 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 OLA1Q9NTK5 396 aaKnown RBP9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 CHMP5Q9NZZ3 219 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 CDV3Q9UKY7 258 aaKnown RBP9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 MMP17Q9ULZ9 603 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 PCDHGA5Q9Y5G8 931 aa9.56□□□□□ -0.88
SNORD88A-201ENST00000408314 TRIM49BA6NDI0 452 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 HHLA1C9JL84 531 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 XPO1O14980 1071 aaKnown RBP9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 BEST1O76090 585 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 RHOBTB1O94844 696 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 KAT7O95251 611 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 IRF1P10914 325 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 CD19P15391 556 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 CHKAP35790 457 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 RAD23BP54727 409 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 ZNF445P59923 1031 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 ZXDBP98169 803 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 MORC3Q14149 939 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 CSRP2Q16527 193 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 GOLGA7BQ2TAP0 167 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 ANO4Q32M45 955 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 USP39Q53GS9 565 aaKnown RBP9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 LY6G5CQ5SRR4 150 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 GRAMD4Q6IC98 578 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 RHBDF2Q6PJF5 856 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 GPRIN1Q7Z2K8 1008 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 PIGZQ86VD9 579 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 BBS7Q8IWZ6 715 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 SIX6OS1Q8N1H7 587 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 DCLK2Q8N568 766 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 GOLGA1Q92805 767 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 SPACA7Q96KW9 195 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 CNOT6LQ96LI5 555 aaKnown RBP9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 IPO9Q96P70 1041 aaKnown RBP9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 KLF16Q9BXK1 252 aaPredicted RBP9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 LRRC4Q9HBW1 653 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 MARK1Q9P0L2 795 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 CTNND2Q9UQB3 1225 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 USP3Q9Y6I4 520 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 MYO15AQ9UKN7 3530 aa9.55□□□□□ -0.88
SNORD88A-201ENST00000408314 A0A0A0MRY4 1105 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 A0A1W2PQH9 124 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 TBC1D3BA6NDS4 549 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 SART1O43290 800 aaKnown RBP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 HRO43593 1189 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 ZBED1O96006 694 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 AFPP02771 609 aaKnown RBP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 CYBBP04839 570 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 ANP32AP39687 249 aaKnown RBP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 DPP6P42658 865 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 PMS1P54277 932 aaKnown RBP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 SEC13P55735 322 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 MARSP56192 900 aaKnown RBP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 YWHAGP61981 247 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 GCNT1Q02742 428 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 KDSRQ06136 332 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 DMWDQ09019 674 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 CRY1Q16526 586 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 LPAL2Q16609 132 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 C2orf27AQ580R0 203 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 SDE2Q6IQ49 451 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 TTI2Q6NXR4 508 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 PKN3Q6P5Z2 889 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 ENOSF1Q7L5Y1 443 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 DGLUCYQ7Z3D6 616 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 ETFBKMTQ8IXQ9 262 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 SCML4Q8N228 414 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 PPM1KQ8N3J5 372 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 TERB1Q8NA31 727 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 C12orf50Q8NA57 414 aaPredicted RBP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 NETO1Q8TDF5 533 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 RNF139Q8WU17 664 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 ERCC4Q92889 916 aaPredicted RBP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 PLD4Q96BZ4 506 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 HHIPQ96QV1 700 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 ARID3AQ99856 593 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 RTKNQ9BST9 563 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 TRIM62Q9BVG3 475 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 BBS2Q9BXC9 721 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 FBRSL1Q9HCM7 1045 aaKnown RBP9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 DACH1Q9UI36 760 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 RASAL2Q9UJF2 1139 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 TSPAN16Q9UKR8 245 aa9.54□□□□□ -0.88
SNORD88A-201ENST00000408314 WDR87Q6ZQQ6 2873 aa9.53□□□□□ -0.88
SNORD88A-201ENST00000408314 PPP1R3GB7ZBB8 358 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms