RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 F9P00740 461 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 UBTFL6P0CB48 400 aaPredicted RBP12.41□□□□□ -0.42
SMCR8-201ENST00000406438 YY1P25490 414 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 SKP1P63208 163 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 DNAJC3Q13217 504 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 CCNI2Q6ZMN8 369 aaPredicted RBP12.41□□□□□ -0.42
SMCR8-201ENST00000406438 STRA8Q7Z7C7 330 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 USP38Q8NB14 1042 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 AHCYL2Q96HN2 611 aaKnown RBP12.41□□□□□ -0.42
SMCR8-201ENST00000406438 ZNF70Q9UC06 446 aaPredicted RBP12.41□□□□□ -0.42
SMCR8-201ENST00000406438 LOC100653049A0A140TA62 436 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 TRIM49D1C9J1S8 452 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 SMIM22K7EJ46 135 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 IGF2BP3O00425 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMCR8-201ENST00000406438 PSMD14O00487 310 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 SKAP2O75563 359 aaPredicted RBP12.41□□□□□ -0.42
SMCR8-201ENST00000406438 KRT34O76011 436 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 GLP2RO95838 553 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 NAMPTP43490 491 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 KIF2BQ8N4N8 673 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 CAMKK1Q8N5S9 505 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 SPIRE2Q8WWL2 714 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 MAGEB18Q96M61 343 aa12.41□□□□□ -0.42
SMCR8-201ENST00000406438 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
SMCR8-201ENST00000406438 PABPC1P11940 636 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 RPS12P25398 132 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 HIRAP54198 1017 aaPredicted RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 NFIL3Q16649 462 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 RNASE11Q8TAA1 199 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 TRPC4Q9UBN4 977 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 FER1L4A9Z1Z3 1794 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 CENPXA8MT69 81 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 FAM220BPB1ANY3 271 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 NR5A2O00482 541 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 CLTBP09497 229 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 TMEM253P0C7T8 217 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 ITGAXP20702 1163 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 ATP6V1B2P21281 511 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 CCT8P50990 548 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 KLHL24Q6TFL4 600 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 ARID3BQ8IVW6 561 aaPredicted RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 FAM111AQ96PZ2 611 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 TARS2Q9BW92 718 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 SERHL2Q9H4I8 314 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 SERHLQ9NQF3 203 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 THG1LQ9NWX6 298 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 ATAD3BQ5T9A4 648 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 CCDC149Q6ZUS6 474 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 ARRDC4Q8NCT1 418 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 PLA2G12BQ9BX93 195 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 SLCO1B7G3V0H7 640 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 NCAM2O15394 837 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 CNPP09543 421 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 TRAF2Q12933 501 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 ATG16L2Q8NAA4 619 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 TDRD5Q8NAT2 981 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 PPP1R10Q96QC0 940 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 KCTD14Q9BQ13 255 aaPredicted RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 PCDH8O95206 1070 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 RXRGP48443 463 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 KLK7P49862 253 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 TSNQ15631 228 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 MACC1Q6ZN28 852 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 BCL2L14Q9BZR8 327 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 ENOPH1Q9UHY7 261 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 VPS28Q9UK41 221 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 UBQLN1Q9UMX0 589 aaKnown RBP12.4□□□□□ -0.42
SMCR8-201ENST00000406438 DAGLAQ9Y4D2 1042 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 ACADSP16219 412 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 MSH3P20585 1137 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 POU1F1P28069 291 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 KCNJ1P48048 391 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 SRLQ86TD4 932 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 C1QTNF7Q9BXJ2 289 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 KLHL4Q9C0H6 718 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 LRRC40Q9H9A6 602 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 VANGL2Q9ULK5 521 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 ZNF609O15014 1411 aa12.4□□□□□ -0.42
SMCR8-201ENST00000406438 CELF2O95319 508 aaKnown RBP12.4□□□□□ -0.43
SMCR8-201ENST00000406438 FMR1Q06787 632 aaKnown RBP eCLIP12.4□□□□□ -0.43
SMCR8-201ENST00000406438 GALNT8Q9NY28 637 aa12.4□□□□□ -0.43
SMCR8-201ENST00000406438 DSG3P32926 999 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
SMCR8-201ENST00000406438 ITIH4Q14624 930 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 PDZK1Q5T2W1 519 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 APLFQ8IW19 511 aaPredicted RBP12.39□□□□□ -0.43
SMCR8-201ENST00000406438 SCUBE1Q8IWY4 988 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 RNFT2Q96EX2 444 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 KLHL28Q9NXS3 571 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 TRPM5Q9NZQ8 1165 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 FRMPD1Q5SYB0 1578 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 PIPSLA2A3N6 862 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 RPN2P04844 631 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 ALDH9A1P49189 494 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 SARSP49591 514 aaKnown RBP12.39□□□□□ -0.43
SMCR8-201ENST00000406438 ADRM1Q16186 407 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 ANKS1AQ92625 1134 aa12.39□□□□□ -0.43
SMCR8-201ENST00000406438 SKA1Q96BD8 255 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms