RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 DNAJC9Q8WXX5 260 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 HAS1Q92839 578 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 USP13Q92995 863 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-204ENST00000400337 TUBGCP3Q96CW5 907 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 VTA1Q9NP79 307 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 NT5MQ9NPB1 228 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 FAM95CA0A1B0GW59 222 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 PTPRAP18433 802 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 CERS5Q8N5B7 392 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 CYP4F12Q9HCS2 524 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 ARHGAP23Q9P227 1491 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 KLC1Q07866 573 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 NFE2Q16621 373 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-204ENST00000400337 OVOS1Q6IE37 1185 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 NT5DC3Q86UY8 548 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.76■□□□□ 0.592e-9■■■■■ 34.5
COL18A1-204ENST00000400337 ARRDC4Q8NCT1 418 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 CELF6Q96J87 481 aaKnown RBP18.76■□□□□ 0.59
COL18A1-204ENST00000400337 VCPIP1Q96JH7 1222 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 ABHD16BQ9H3Z7 469 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 SCUBE3Q8IX30 993 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 GPC2Q8N158 579 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 SEPT8Q92599 483 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 SLC24A2Q9UI40 661 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 HAO1Q9UJM8 370 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 RIC1Q4ADV7 1423 aa18.76■□□□□ 0.59
COL18A1-204ENST00000400337 KPNA6O60684 536 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 RPLP2P05387 115 aaKnown RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 RARAP10276 462 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 MEA1Q16626 185 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 CCDC60Q8IWA6 550 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 CCDC134Q9H6E4 229 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 SCUBE2Q9NQ36 999 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 PCDHA3Q9Y5H8 950 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 PCDHAC2Q9Y5I4 1007 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 VPS26AO75436 327 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 HSPA1AP0DMV8 641 aaKnown RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 HSPA1BP0DMV9 641 aaKnown RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 MZF1P28698 734 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 BTKQ06187 659 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 NEUROG2Q9H2A3 272 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 NMRK2Q9NPI5 230 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 MEIS2O14770 477 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 GJB6O95452 261 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 CDH2P19022 906 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 SERPINB5P36952 375 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 MFSD10Q14728 455 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 MFSD7Q6UXD7 560 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 TLK2Q86UE8 772 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 SUGP1Q8IWZ8 645 aaKnown RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 CDCA5Q96FF9 252 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 VPS28Q9UK41 221 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 NAALADL1Q9UQQ1 740 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 DLG4P78352 724 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 TMEM132BQ14DG7 1078 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 AASDHQ4L235 1098 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 LRRC10BA6NIK2 292 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 SLURP2P0DP57 97 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 ADCYAP1R1P41586 468 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 RPL21P46778 160 aaKnown RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 CORO7P57737 925 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 STX5Q13190 355 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 MPP3Q13368 585 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 AARS2Q5JTZ9 985 aaKnown RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 C15orf52Q6ZUT6 534 aaKnown RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 C3orf20Q8ND61 904 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 ZSWIM2Q8NEG5 633 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 MTG1Q9BT17 334 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-204ENST00000400337 LRRC4BQ9NT99 713 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 SIK3Q9Y2K2 1263 aa18.75■□□□□ 0.59
COL18A1-204ENST00000400337 RIPK2O43353 540 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 PSMD10O75832 226 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 URODP06132 367 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 RHOCP08134 193 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 GHRP10912 638 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 ERVK-9P63128 1117 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 HLA-DPA1P20036 260 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 KCNA3P22001 575 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 YWHAZP63104 245 aaKnown RBP18.74■□□□□ 0.59
COL18A1-204ENST00000400337 PPP3CAQ08209 521 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 ITIH4Q14624 930 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 VPS37AQ8NEZ2 397 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 DDI1Q8WTU0 396 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 KAT5Q92993 513 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 RBM22Q9NW64 420 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■□□□ 11.4
COL18A1-204ENST00000400337 SHOC2Q9UQ13 582 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 DNAJC16Q9Y2G8 782 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 TBCBQ99426 244 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 VANGL2Q9ULK5 521 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 ALDH2P05091 517 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 UBA1P22314 1058 aaKnown RBP18.74■□□□□ 0.59
COL18A1-204ENST00000400337 AQP5P55064 265 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 DDX39BQ13838 428 aaKnown RBP18.74■□□□□ 0.59
COL18A1-204ENST00000400337 PDGFCQ9NRA1 345 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 SYNPO2Q9UMS6 1093 aa18.74■□□□□ 0.59
COL18A1-204ENST00000400337 DRG1Q9Y295 367 aaKnown RBP18.74■□□□□ 0.59
COL18A1-204ENST00000400337 EVPLLA8MZ36 301 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 CCR1P32246 355 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 ELK3P41970 407 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 SLC2A14Q8TDB8 520 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms