RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ANGPT2O15123 496 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 PMPCBO75439 489 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 ERN1O75460 977 aaKnown RBP8.21□□□□□ -1.09
USP47-203ENST00000399455 IFT88Q13099 833 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 TIGD5Q53EQ6 642 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 TMCO5AQ8N6Q1 288 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 C10orf53Q8N6V4 93 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 FOXP3Q9BZS1 431 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 RUBCNLQ9H714 662 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 ZMYM5Q9UJ78 669 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 ANGPTL2Q9UKU9 493 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 ANKRD26Q9UPS8 1709 aa8.21□□□□□ -1.09
USP47-203ENST00000399455 A0A1W2PQJ5 194 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 OPHN1O60890 802 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 ADIGQ0VDE8 80 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 ZNF211Q13398 564 aaPredicted RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 CEP70Q8NHQ1 597 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 FAM172AQ8WUF8 416 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 TMEM60Q9H2L4 133 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 NT5MQ9NPB1 228 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 UBA2Q9UBT2 640 aaPredicted RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 SNX24Q9Y343 169 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 SF3A3Q12874 501 aaKnown RBP eCLIP8.21□□□□□ -1.15e-6■■□□□ 14.3
USP47-203ENST00000399455 ARID5BQ14865 1188 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 CCNJLQ8IV13 435 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 RUBCNQ92622 972 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 PORCNQ9H237 461 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 CCL16O15467 120 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 PAEPP09466 180 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 ESRRAP11474 423 aaPredicted RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 PCNAP12004 261 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 TGM2P21980 687 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 CHI3L1P36222 383 aaPredicted RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 CSE1LP55060 971 aaKnown RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 FAM83EQ2M2I3 478 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 TTC39BQ5VTQ0 682 aaPredicted RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 SLC24A5Q71RS6 500 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 NLRP9Q7RTR0 991 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 NUP93Q8N1F7 819 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 SYN2Q92777 582 aaPredicted RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 MYCBPQ99417 103 aaPredicted RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 TASP1Q9H6P5 420 aa8.21□□□□□ -1.1
USP47-203ENST00000399455 XAB2Q9HCS7 855 aaKnown RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 TDRKHQ9Y2W6 561 aaKnown RBP8.21□□□□□ -1.1
USP47-203ENST00000399455 CACNB4O00305 520 aaPredicted RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 FGF10O15520 208 aaPredicted RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 ENDOD1O94919 500 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 SERPINF2P08697 491 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CRHR2Q13324 411 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 SLC18A3Q16572 532 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ARMC12Q5T9G4 340 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 AGAP9Q5VTM2 703 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CACHD1Q5VU97 1274 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CNKSR3Q6P9H4 555 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 DOK6Q6PKX4 331 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 PRPF39Q86UA1 669 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 LPCAT1Q8NF37 534 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CXorf40BQ96DE9 158 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 SLC39A8Q9C0K1 460 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ZCCHC17Q9NP64 241 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 AP4E1Q9UPM8 1137 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 EIF3LQ9Y262 564 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 DERAQ9Y315 318 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 GPSM3Q9Y4H4 160 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ADGRA2Q96PE1 1338 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ZNF280AP59817 542 aaPredicted RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 ERVK-21P61565 698 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 SUZ12Q15022 739 aaKnown RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 CLEC16AQ2KHT3 1053 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 LYPLAL1Q5VWZ2 237 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CENPPQ6IPU0 288 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 FOXR1Q6PIV2 292 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 C16orf59Q7L2K0 433 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CAMKK1Q8N5S9 505 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 TRAPPC12Q8WVT3 735 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 SLC13A1Q9BZW2 595 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ZNF556Q9HAH1 456 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CISHQ9NSE2 258 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 MARCH2Q9P0N8 246 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 TCRBV5S4A2TA0A5A2 114 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 SPATA31C2B4DYI2 1134 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ZSCAN9O15535 394 aaPredicted RBP8.2□□□□□ -1.1
USP47-203ENST00000399455 GLP2RO95838 553 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ANXA5P08758 320 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 SCNN1BP51168 640 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 NDST1P52848 882 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 TROAPQ12815 778 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 STAT4Q14765 748 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 NCAPHQ15003 741 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ERMARDQ5T6L9 678 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 EMBQ6PCB8 327 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 TADA1Q96BN2 335 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CYTH2Q99418 400 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 INTUQ9ULD6 942 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 HS6ST1O60243 411 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 DIAPH2O60879 1101 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 CCNDBP1O95273 360 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 ITGB6P18564 788 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 BDNFP23560 247 aa8.2□□□□□ -1.1
USP47-203ENST00000399455 TUBP50607 506 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms