RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 CTNNA2P26232 953 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 YWHAQP27348 245 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 IL1R2P27930 398 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 CTNNA1P35221 906 aaKnown RBP16.96■□□□□ 0.31
TNRC18-202ENST00000399434 SLC1A1P43005 524 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 ATXN1P54253 815 aaKnown RBP16.96■□□□□ 0.31
TNRC18-202ENST00000399434 YWHAGP61981 247 aaKnown RBP eCLIP16.96■□□□□ 0.31
TNRC18-202ENST00000399434 ATP11AP98196 1134 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 TAF10Q12962 218 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 PRPF38BQ5VTL8 546 aaKnown RBP16.96■□□□□ 0.31
TNRC18-202ENST00000399434 KREMEN2Q8NCW0 462 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 KIF18AQ8NI77 898 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 MICAL1Q8TDZ2 1067 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 EDEM1Q92611 657 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 CENPIQ92674 756 aaPredicted RBP16.96■□□□□ 0.31
TNRC18-202ENST00000399434 PEBP4Q96S96 227 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 FBXO44Q9H4M3 255 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 COMMD8Q9NX08 183 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 LCMT1Q9UIC8 334 aa16.96■□□□□ 0.31
TNRC18-202ENST00000399434 C8AP07357 584 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 SDC4P31431 198 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 NOS2P35228 1153 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 PEX5P50542 639 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 HDAC4P56524 1084 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 RPS6KA1Q15418 735 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 CDO1Q16878 200 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 DCAF6Q58WW2 860 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 PDE12Q6L8Q7 609 aaKnown RBP16.95■□□□□ 0.3
TNRC18-202ENST00000399434 CC2D1AQ6P1N0 951 aaPredicted RBP16.95■□□□□ 0.3
TNRC18-202ENST00000399434 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.95■□□□□ 0.3
TNRC18-202ENST00000399434 COG1Q8WTW3 980 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 FAM172AQ8WUF8 416 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 FBXO32Q969P5 355 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 MYRFLQ96LU7 910 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 PSMB7Q99436 277 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 ZNF334Q9HCZ1 680 aaPredicted RBP16.95■□□□□ 0.3
TNRC18-202ENST00000399434 NOTCH4Q99466 2003 aa16.95■□□□□ 0.3
TNRC18-202ENST00000399434 DOCK6Q96HP0 2047 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 PER2O15055 1255 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 SRGAP2O75044 1071 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 IGLV3-25P01717 112 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 MIPP30301 263 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 ELF1P32519 619 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 ALDH1A3P47895 512 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 SULT1E1P49888 294 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 RBM10P98175 930 aaKnown RBP16.94■□□□□ 0.3
TNRC18-202ENST00000399434 PLD1Q13393 1074 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 SLC25A52Q3SY17 297 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 BEND5Q7L4P6 421 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 TAC4Q86UU9 113 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 DQX1Q8TE96 717 aaKnown RBP16.94■□□□□ 0.3
TNRC18-202ENST00000399434 TRMT2BQ96GJ1 504 aaKnown RBP16.94■□□□□ 0.3
TNRC18-202ENST00000399434 OSBPL9Q96SU4 736 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 MAN1C1Q9NR34 630 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 MAGED2Q9UNF1 606 aaPredicted RBP16.94■□□□□ 0.3
TNRC18-202ENST00000399434 PCDHA3Q9Y5H8 950 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 C2orf16Q68DN1 1984 aa16.94■□□□□ 0.3
TNRC18-202ENST00000399434 MIF4GDA9UHW6 222 aaKnown RBP16.93■□□□□ 0.3
TNRC18-202ENST00000399434 ZNF185O15231 689 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 ENDOD1O94919 500 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 C1RP00736 705 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 CSH1P0DML2 217 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 CSH2P0DML3 217 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 NCAM1P13591 858 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 CXCR5P32302 372 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 ACAP1Q15027 740 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 ATP13A4Q4VNC1 1196 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 DNTTIP2Q5QJE6 756 aaKnown RBP16.93■□□□□ 0.3
TNRC18-202ENST00000399434 TMEM150AQ86TG1 271 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 MON1AQ86VX9 555 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 TMC8Q8IU68 726 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 VN1R2Q8NFZ6 395 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 ADAM32Q8TC27 787 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 PSMG2Q969U7 264 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 ACSF2Q96CM8 615 aaPredicted RBP16.93■□□□□ 0.3
TNRC18-202ENST00000399434 LRRC3Q9BY71 257 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 IL21Q9HBE4 155 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 NRG2O14511 850 aaPredicted RBP16.93■□□□□ 0.3
TNRC18-202ENST00000399434 PSTPIP1O43586 416 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 PCK1P35558 622 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 EPHB3P54753 998 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 MSANTD2Q6P1R3 559 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 CCDC149Q6ZUS6 474 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 DNAJB7Q7Z6W7 309 aaPredicted RBP16.93■□□□□ 0.3
TNRC18-202ENST00000399434 ABCC13Q9NSE7 274 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 PIGVQ9NUD9 493 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 KLHL11Q9NVR0 708 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.93■□□□□ 0.3
TNRC18-202ENST00000399434 EHD2Q9NZN4 543 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 NUDT5Q9UKK9 219 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 STAP1Q9ULZ2 295 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 HCFC2Q9Y5Z7 792 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 MRFAP1Q9Y605 127 aa16.93■□□□□ 0.3
TNRC18-202ENST00000399434 HELZP42694 1942 aaKnown RBP16.92■□□□□ 0.3
TNRC18-202ENST00000399434 CCDC66A2RUB6 948 aa16.92■□□□□ 0.3
TNRC18-202ENST00000399434 RFPL2O75678 378 aa16.92■□□□□ 0.3
TNRC18-202ENST00000399434 URI1O94763 535 aaPredicted RBP16.92■□□□□ 0.3
TNRC18-202ENST00000399434 TRUB2O95900 331 aaKnown RBP16.92■□□□□ 0.3
TNRC18-202ENST00000399434 PRLRP16471 622 aa16.92■□□□□ 0.3
TNRC18-202ENST00000399434 GTF2F1P35269 517 aaKnown RBP eCLIP16.92■□□□□ 0.32e-7■■■■□ 19.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms