RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 SCNN1AP37088 669 aa24■■□□□ 1.43
RABGGTA-202ENST00000399409 FAAP100Q0VG06 881 aa24■■□□□ 1.43
RABGGTA-202ENST00000399409 MTM1Q13496 603 aa24■■□□□ 1.43
RABGGTA-202ENST00000399409 TTC39BQ5VTQ0 682 aaPredicted RBP24■■□□□ 1.43
RABGGTA-202ENST00000399409 NLRP9Q7RTR0 991 aa24■■□□□ 1.43
RABGGTA-202ENST00000399409 BEST2Q8NFU1 509 aa24■■□□□ 1.43
RABGGTA-202ENST00000399409 L3MBTL3Q96JM7 780 aaPredicted RBP24■■□□□ 1.43
RABGGTA-202ENST00000399409 SAR1AQ9NR31 198 aa24■■□□□ 1.43
RABGGTA-202ENST00000399409 CDKN2AIPQ9NXV6 580 aaPredicted RBP24■■□□□ 1.43
RABGGTA-202ENST00000399409 PIAS1O75925 651 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 NPTXRO95502 500 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 ADORA2AP29274 412 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 LGSNQ5TDP6 509 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 SH2D5Q6ZV89 423 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 SNX27Q96L92 541 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 KLF6Q99612 283 aaPredicted RBP23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 NPHS2Q9NP85 383 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 PAPSS1O43252 624 aaPredicted RBP23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 CDC42EP1Q00587 391 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 MARCH8Q5T0T0 291 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 ARCQ7LC44 396 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 CFAP36Q96G28 342 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 SERAC1Q96JX3 654 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 TRIM55Q9BYV6 548 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 TTLL3Q9Y4R7 772 aa23.99■■□□□ 1.43
RABGGTA-202ENST00000399409 RALGAPA2Q2PPJ7 1873 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 WDR91A4D1P6 747 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 KRT37O76014 449 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 IL1BP01584 269 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 ADCYAP1R1P41586 468 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 ETV4P43268 484 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 ZBTB6Q15916 424 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 SCUBE3Q8IX30 993 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 ZC3H15Q8WU90 426 aaKnown RBP23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 KATNBL1Q9H079 304 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 NRDE2Q9H7Z3 1164 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 ZC3H7BQ9UGR2 993 aaKnown RBP23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 ZFP69BQ9UJL9 534 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 ECM2O94769 699 aaPredicted RBP23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 TGDSO95455 350 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 HOXD8P13378 290 aaPredicted RBP23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 PRKCHP24723 683 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 HDAC4P56524 1084 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 SLC27A1Q6PCB7 646 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 GIMAP7Q8NHV1 300 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 TSSK1BQ9BXA7 367 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 POPDC2Q9HBU9 364 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 FAM49BQ9NUQ9 324 aa23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 NOP53Q9NZM5 478 aaKnown RBP23.98■■□□□ 1.43
RABGGTA-202ENST00000399409 TRAFD1O14545 582 aaPredicted RBP23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 STRNO43815 780 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 AVILO75366 819 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 CYP2C8P10632 490 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 CYP2F1P24903 491 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 TARSP26639 723 aaKnown RBP23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 NR2C2P49116 596 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 DPYSL2Q16555 572 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 CA9Q16790 459 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 CAND1Q86VP6 1230 aaKnown RBP23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 LRRC6Q86X45 466 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 TUBB6Q9BUF5 446 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 GCOM2Q9BZD3 368 aaPredicted RBP23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 DNAI2Q9GZS0 605 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 HAO1Q9UJM8 370 aa23.97■■□□□ 1.43
RABGGTA-202ENST00000399409 RRN3P2A6NIE6 340 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 GCATO75600 419 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 C1QAP02745 245 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 SNRPAP09012 282 aaKnown RBP23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 PYGBP11216 843 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 USP50Q70EL3 339 aaPredicted RBP23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 SLC26A9Q7LBE3 791 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 CENPIQ92674 756 aaPredicted RBP23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 SNTG2Q9NY99 539 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 A6NJR5 290 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 T-ENOLP0DO92 83 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 TPSB2P20231 275 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 PCBP1Q15365 356 aaKnown RBP eCLIP23.96■■□□□ 1.431e-6■■■□□ 16.1
RABGGTA-202ENST00000399409 TPSAB1Q15661 275 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 OR6B3Q8NGW1 331 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 C11orf84Q9BUA3 381 aaPredicted RBP23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 ADAMTS10Q9H324 1103 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 RNF181Q9P0P0 153 aa23.96■■□□□ 1.43
RABGGTA-202ENST00000399409 CAPN15O75808 1086 aa23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 HOXA11P31270 313 aaPredicted RBP23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 L1CAMP32004 1257 aa23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 GJA5P36382 358 aa23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 BST2Q10589 180 aaKnown RBP23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 PRPF39Q86UA1 669 aaKnown RBP23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 VPS52Q8N1B4 723 aa23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 PPM1NQ8N819 430 aa23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 UTP4Q969X6 686 aaKnown RBP23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 STAMBPL1Q96FJ0 436 aa23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 ZMAT2Q96NC0 199 aaKnown RBP23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 IQCGQ9H095 443 aaKnown RBP23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 LNPEPQ9UIQ6 1025 aa23.95■■□□□ 1.43
RABGGTA-202ENST00000399409 A8MUI8 341 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 COPEO14579 308 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 PPEF2O14830 753 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 KLF11O14901 512 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 GABBR2O75899 941 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms