RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 NCAM2O15394 837 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CHRNB1P11230 501 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ATP1A3P13637 1013 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 GPD2P43304 727 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PSEN1P49768 467 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NUBP1P53384 320 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 YWHAGP61981 247 aaKnown RBP eCLIP14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RAPGEF1Q13905 1077 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ANGPT1Q15389 498 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DENND1BQ6P3S1 775 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DDX42Q86XP3 938 aaKnown RBP eCLIP14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MIB1Q86YT6 1006 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SIX6OS1Q8N1H7 587 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CPA6Q8N4T0 437 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CLEC4CQ8WTT0 213 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 LSM14BQ9BX40 385 aaKnown RBP14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 KLF16Q9BXK1 252 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CLIC5Q9NZA1 410 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DNMT3LQ9UJW3 386 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SH3BP1Q9Y3L3 701 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MIA3Q5JRA6 1907 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 E2F8A0AVK6 867 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RALAP11233 206 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 UCHL3P15374 230 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ZNF18P17022 549 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CDK11BP21127 795 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CLCN1P35523 988 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 COPB1P53618 953 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PTPN5P54829 565 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NHLH1Q02575 133 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 EFEMP1Q12805 493 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SLC47A2Q86VL8 602 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 C1orf210Q8IVY1 113 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 BBS7Q8IWZ6 715 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DHX40Q8IX18 779 aaKnown RBP14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MSANTD3Q96H12 275 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FUCA2Q9BTY2 467 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ST7Q9NRC1 585 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FAM86C1Q9NVL1 165 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CYTH4Q9UIA0 394 aa14.79□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CACNA1IQ9P0X4 2223 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MED7O43513 233 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 GREM1O60565 184 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NFATC1O95644 943 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CYP17A1P05093 508 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RPS9P46781 194 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DAOAP59103 153 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MTAPQ13126 283 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 GAS6Q14393 721 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DRAP1Q14919 205 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 KLHDC10Q6PID8 442 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 C1orf228Q6PIY5 440 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RHBDF2Q6PJF5 856 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 APTXQ7Z2E3 356 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ARHGAP18Q8N392 663 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ZNF276Q8N554 614 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 EDEM1Q92611 657 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NAA15Q9BXJ9 866 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MIS12Q9H081 205 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NAT10Q9H0A0 1025 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CNGB3Q9NQW8 809 aa14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SPATA6Q9NWH7 488 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 LIMA1Q9UHB6 759 aaKnown RBP14.78□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SLC9A3R1O14745 358 aaPredicted RBP14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 EPHB6O15197 1021 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 TPM2P07951 284 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 HMBSP08397 361 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ZNF165P49910 485 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 GALK1P51570 392 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PTK2Q05397 1052 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NR1H3Q13133 447 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CCINQ13939 588 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DHCR24Q15392 516 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 GAB4Q2WGN9 574 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 TMEM196Q5HYL7 178 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 BSPRYQ5W0U4 402 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 BTBD8Q5XKL5 378 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FSTL4Q6MZW2 842 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 Q6ZS52 159 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RSRC2Q7L4I2 434 aaKnown RBP14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PASD1Q8IV76 773 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SCUBE3Q8IX30 993 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FAM71AQ8IYT1 594 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MAML2Q8IZL2 1156 aaPredicted RBP14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 HSFY1Q96LI6 401 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PHOX2BQ99453 314 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FAM207AQ9NSI2 230 aaPredicted RBP14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 TBC1D14Q9P2M4 693 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RASAL2Q9UJF2 1139 aa14.77□□□□□ -0.04
HLA-DQB1-202ENST00000399079 LRRC10BA6NIK2 292 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TRDMT1O14717 391 aaKnown RBP14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 STC2O76061 302 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 AMPD2Q01433 879 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 LY6G5CQ5SRR4 150 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 FKBP15Q5T1M5 1219 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 HTR3DQ70Z44 454 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TADA2BQ86TJ2 420 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SCML4Q8N228 414 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 WDTC1Q8N5D0 677 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 KIAA1958Q8N8K9 716 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms