RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 NEDD8Q15843 81 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 TRIM71Q2Q1W2 868 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 DEFB118Q96PH6 123 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 P2RX7Q99572 595 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 HMX1Q9NP08 348 aaPredicted RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 BUD23O43709 281 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 TOMM70O94826 608 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 SEMA3DO95025 777 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 ALOX12P18054 663 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 SLC29A2Q14542 456 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 PLPP4Q5VZY2 271 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 SCARA3Q6AZY7 606 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 C11orf88Q6PI97 169 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 ADGRA1Q86SQ6 560 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 SERAC1Q96JX3 654 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 RBM15Q96T37 977 aaKnown RBP eCLIP9.63□□□□□ -0.874e-6■■■■■ 29.2
ATL3-201ENST00000398868 PADI4Q9UM07 663 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 RUVBL2Q9Y230 463 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 TRBV23OR9-2A0A075B6M9 112 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 STX7O15400 261 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 ZNF23P17027 643 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 NDUFV1P49821 464 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 CACNA2D1P54289 1103 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 MAPRE2Q15555 327 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 SETD3Q86TU7 594 aaPredicted RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 PARP8Q8N3A8 854 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 TMEM237Q96Q45 408 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 COPS7BQ9H9Q2 264 aaPredicted RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 IARS2Q9NSE4 1012 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 SLC9A8Q9Y2E8 581 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 NEU2Q9Y3R4 380 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 ALKQ9UM73 1620 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 RASSF9O75901 435 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 CLPTM1O96005 669 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 AGTP01019 485 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 ENO2P09104 434 aaPredicted RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 POU1F1P28069 291 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 CCT3P49368 545 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 CSNK2BP67870 215 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 CAMK2GQ13555 558 aaPredicted RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 GRIK4Q16099 956 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 TCHHL1Q5QJ38 904 aaPredicted RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 PPP1R2P3Q6NXS1 205 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 OTOP2Q7RTS6 562 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 SLC47A2Q86VL8 602 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 ERO1BQ86YB8 467 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 FAM96AQ9H5X1 160 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 ZDHHC6Q9H6R6 413 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 CHKBQ9Y259 395 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 MAGEB2O15479 319 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 ASNA1O43681 348 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 EXTL3O43909 919 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 NDUFS2O75306 463 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 POLBP06746 335 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 MYL2P10916 166 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 INSRRP14616 1297 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 BDNFP23560 247 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 HERVK_113P62684 666 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 SGCGQ13326 291 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 CNGA2Q16280 664 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 PPM1LQ5SGD2 360 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 BARGINQ6ZT62 677 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 PTF1AQ7RTS3 328 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 USP13Q92995 863 aaPredicted RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 NACC2Q96BF6 587 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 PLEKHA8Q96JA3 519 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 MROH8Q9H579 483 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 PXMP2Q9NR77 195 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 TRIM13O60858 407 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 FGFR3P22607 806 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 FEN1P39748 380 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 BYSLQ13895 437 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 TSHZ1Q6ZSZ6 1077 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 PACS2Q86VP3 889 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 PROM2Q8N271 834 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 C19orf18Q8NEA5 215 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 TFB1MQ8WVM0 346 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 TRIM9Q9C026 710 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 DMAP1Q9NPF5 467 aaPredicted RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 ALKBH4Q9NXW9 302 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 ETAA1Q9NY74 926 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 LCMT1Q9UIC8 334 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 SHOC2Q9UQ13 582 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 ABCA8O94911 1581 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 FAM187AA6NFU0 413 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 FAM86B1E9PN63 330 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 H3BRB1 525 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 TSPAN9O75954 239 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 RHOCP08134 193 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 USP17L7P0C7H9 530 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 UCHL3P15374 230 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 HNF4AP41235 474 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 ADARP55265 1226 aaKnown RBP9.62□□□□□ -0.87
ATL3-201ENST00000398868 SEMA3FQ13275 785 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 POU6F1Q14863 301 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 RNF19BQ6ZMZ0 732 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 COL26A1Q96A83 441 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 SPATC1LQ9H0A9 340 aa9.62□□□□□ -0.87
ATL3-201ENST00000398868 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
ATL3-201ENST00000398868 KLHL3Q9UH77 587 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms