RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 PDGFRBP09619 1106 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 GNL1P36915 607 aaPredicted RBP14.4□□□□□ -0.1
PRAME-202ENST00000398743 PNPLA4P41247 253 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 SLC1A5Q15758 541 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 PRAMEF19Q5SWL8 479 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 SYCP2LQ5T4T6 812 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 HHATQ5VTY9 493 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 RNF43Q68DV7 783 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 SLC26A9Q7LBE3 791 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 ARCQ7LC44 396 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 TLK2Q86UE8 772 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 CRYBG2Q8N1P7 616 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 LRRC8CQ8TDW0 803 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 CLEC4CQ8WTT0 213 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 DCAKDQ8WVC6 231 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 DNAJB3Q8WWF6 145 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 PTPN18Q99952 460 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 KLC2Q9H0B6 622 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 RXFP1Q9HBX9 757 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 CYLDQ9NQC7 956 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 GRID1Q9ULK0 1009 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 TEX264Q9Y6I9 313 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 DCAF8L1A6NGE4 600 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 ECM2O94769 699 aaPredicted RBP14.4□□□□□ -0.1
PRAME-202ENST00000398743 FGFR1P11362 822 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 LCP1P13796 627 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 CYP2F1P24903 491 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 SCNN1AP37088 669 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 SNX17Q15036 470 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 DPYSL2Q16555 572 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 GALNTL6Q49A17 601 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 SPRYD7Q5W111 196 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 IGDCC3Q8IVU1 814 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 CCDC63Q8NA47 563 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 MZB1Q8WU39 189 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 TMEM40Q8WWA1 233 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 ALKBH8Q96BT7 664 aaKnown RBP14.4□□□□□ -0.1
PRAME-202ENST00000398743 C11orf84Q9BUA3 381 aaPredicted RBP14.4□□□□□ -0.1
PRAME-202ENST00000398743 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 NRDE2Q9H7Z3 1164 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 GDAP2Q9NXN4 497 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 KLK14Q9P0G3 267 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 PHTF1Q9UMS5 762 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 IKBKGQ9Y6K9 419 aa14.4□□□□□ -0.1
PRAME-202ENST00000398743 IQANK1A0A1B0GTG1 560 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 TCRBV9S1A1TA0A576 114 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 CFAP73A6NFT4 308 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 MAP3K6O95382 1288 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 TFE3P19532 575 aaPredicted RBP14.39□□□□□ -0.11
PRAME-202ENST00000398743 LMO2P25791 158 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 ACADSBP45954 432 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 RPL34P49207 117 aaKnown RBP14.39□□□□□ -0.11
PRAME-202ENST00000398743 TAF6P49848 677 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 YWHAGP61981 247 aaKnown RBP eCLIP14.39□□□□□ -0.11
PRAME-202ENST00000398743 CBLBQ13191 982 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 IRF5Q13568 498 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 SEPT7Q16181 437 aaKnown RBP14.39□□□□□ -0.11
PRAME-202ENST00000398743 LVRNQ6Q4G3 990 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 CDKL3Q8IVW4 592 aaPredicted RBP14.39□□□□□ -0.11
PRAME-202ENST00000398743 FITM2Q8N6M3 262 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 APPL2Q8NEU8 664 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 SPOCK2Q92563 424 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 CENPIQ92674 756 aaPredicted RBP14.39□□□□□ -0.11
PRAME-202ENST00000398743 RMDN2Q96LZ7 410 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 TSPAN18Q96SJ8 248 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 DHX35Q9H5Z1 703 aaKnown RBP14.39□□□□□ -0.11
PRAME-202ENST00000398743 SCN1AP35498 2009 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 SPTLC1O15269 473 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 TM9SF1O15321 606 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 AVILO75366 819 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 KCNE1P15382 129 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 ZFXP17010 805 aaPredicted RBP14.39□□□□□ -0.11
PRAME-202ENST00000398743 L1CAMP32004 1257 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 ADAM17P78536 824 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 HIC1Q14526 733 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 SV2CQ496J9 727 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 XKR4Q5GH76 650 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 PARP9Q8IXQ6 854 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 SLC2A14Q8TDB8 520 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 ETNK2Q9NVF9 386 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 AP4E1Q9UPM8 1137 aa14.39□□□□□ -0.11
PRAME-202ENST00000398743 TREHO43280 583 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 INHBAP08476 426 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 PSEN2P49810 448 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 MNAT1P51948 309 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 ATXN1P54253 815 aaKnown RBP14.38□□□□□ -0.11
PRAME-202ENST00000398743 YWHAZP63104 245 aaKnown RBP14.38□□□□□ -0.11
PRAME-202ENST00000398743 ZNF200P98182 395 aaPredicted RBP14.38□□□□□ -0.11
PRAME-202ENST00000398743 MGAT5Q09328 741 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 BNIP1Q12981 228 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 PTK7Q13308 1070 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 KBTBD12Q3ZCT8 623 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 OLFML2BQ68BL8 750 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 C4orf22Q6V702 233 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 LENG1Q96BZ8 264 aaPredicted RBP14.38□□□□□ -0.11
PRAME-202ENST00000398743 TNIP3Q96KP6 325 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 HSFY1Q96LI6 401 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 ECT2Q9H8V3 914 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 SLCO1B3Q9NPD5 702 aa14.38□□□□□ -0.11
PRAME-202ENST00000398743 ZNF236Q9UL36 1845 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms