RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 MYO1CO00159 1063 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 AGTP01019 485 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 FDPSP14324 419 aaKnown RBP14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 CAMK2GQ13555 558 aaPredicted RBP14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 CUL2Q13617 745 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 MTFR1Q15390 333 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 CLEC16AQ2KHT3 1053 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 TRAPPC11Q7Z392 1133 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 JAMLQ86YT9 394 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 MSL3Q8N5Y2 521 aaKnown RBP14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 AHCYL2Q96HN2 611 aaKnown RBP14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 TBC1D4O60343 1298 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 KCNK10P57789 538 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 CCZ1BP86790 482 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 CCZ1P86791 482 aaPredicted RBP14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 KYNUQ16719 465 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 LVRNQ6Q4G3 990 aa14.71□□□□□ -0.05
PCDHA11-201ENST00000398640 GPR25O00155 361 aa14.71□□□□□ -0.06
PCDHA11-201ENST00000398640 FOXP2O15409 715 aa14.71□□□□□ -0.06
PCDHA11-201ENST00000398640 SGCGQ13326 291 aa14.71□□□□□ -0.06
PCDHA11-201ENST00000398640 NR1I3Q14994 352 aa14.71□□□□□ -0.06
PCDHA11-201ENST00000398640 CHI3L2Q15782 390 aa14.71□□□□□ -0.06
PCDHA11-201ENST00000398640 KCNT1Q5JUK3 1230 aa14.71□□□□□ -0.06
PCDHA11-201ENST00000398640 ZNF229Q9UJW7 825 aa14.71□□□□□ -0.06
PCDHA11-201ENST00000398640 MLNP12872 115 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 MAGEA9P43362 315 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 EDRF1Q3B7T1 1238 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 KLHDC7AQ5VTJ3 777 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 NAPEPLDQ6IQ20 393 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 SLC44A2Q8IWA5 706 aaPredicted RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 MIER2Q8N344 545 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 THTPAQ9BU02 230 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 NSMCE4AQ9NXX6 385 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 TRMT6Q9UJA5 497 aaKnown RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 ALG6Q9Y672 507 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 LRP6O75581 1613 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 SGPL1O95470 568 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 CTDNEP1O95476 244 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 EIF2B5Q13144 721 aaKnown RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 GPATCH2LQ9NWQ4 482 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 CYTH3O43739 400 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 PLEKP08567 350 aaPredicted RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 ALDH6A1Q02252 535 aaKnown RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 GRB10Q13322 594 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 FNDC3BQ53EP0 1204 aaKnown RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 FAM180AQ6UWF9 173 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 PALB2Q86YC2 1186 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 CYFIP2Q96F07 1278 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 ARL2BPQ9Y2Y0 163 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 SPACA6W5XKT8 324 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 CAND2O75155 1236 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 SPIRE2Q8WWL2 714 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 POP1Q99575 1024 aaKnown RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 ZSCAN32Q9NX65 697 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 DDX43Q9NXZ2 648 aaKnown RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 NDOR1Q9UHB4 597 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 ADCY6O43306 1168 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 TBL3Q12788 808 aaKnown RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 NFE2Q16621 373 aaPredicted RBP14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 ADCK1Q86TW2 530 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 THAP2Q9H0W7 228 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 C11orf49Q9H6J7 331 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 PCDHB5Q9Y5E4 795 aa14.7□□□□□ -0.06
PCDHA11-201ENST00000398640 ARHGEF9O43307 516 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 WDR47O94967 919 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 SNRPAP09012 282 aaKnown RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 GARTP22102 1010 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 TRIM60Q495X7 471 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 NOL9Q5SY16 702 aaKnown RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 E4F1Q66K89 784 aaPredicted RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 PPP1R2P1Q96PQ5 205 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 OLFML3Q9NRN5 406 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 RNF112Q9ULX5 631 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 LOC100653049A0A140TA62 436 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 UNCXA6NJT0 531 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 KRT34O76011 436 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 MDH1P40925 334 aaKnown RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 SKOR1P84550 965 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 C16orf89Q6UX73 402 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 RAD9BQ6WBX8 426 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 VSIG10LQ86VR7 867 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 CNPY4Q8N129 248 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 EME1Q96AY2 570 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 MKNK1Q9BUB5 465 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 AGPAT3Q9NRZ7 376 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 TRIM16O95361 564 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 PCNAP12004 261 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 OVOS1Q6IE37 1185 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 ZNF438Q7Z4V0 828 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 PDLIM2Q96JY6 352 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 TLR8Q9NR97 1041 aaKnown RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 APPL1Q9UKG1 709 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 SNCAIPQ9Y6H5 919 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 SSU72P8A0A1W2PR75 194 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 TGM2P21980 687 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 ACAT1P24752 427 aaKnown RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 NDUFV1P49821 464 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 CENPPQ6IPU0 288 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms