RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 FAM186AA6NE01 2351 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 PROB1E7EW31 1015 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 SLC9A3R1O14745 358 aaPredicted RBP17.55■□□□□ 0.4
APTR-201ENST00000398043 SCAMP3O14828 347 aaKnown RBP17.55■□□□□ 0.4
APTR-201ENST00000398043 MDM4O15151 490 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 NFATC1O95644 943 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 ZBED1O96006 694 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 SP9P0CG40 484 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 TDGF1P13385 188 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 OPRD1P41143 372 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 GALK1P51570 392 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 SLC8A3P57103 927 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 DHCR24Q15392 516 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 STX1AQ16623 288 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 MEA1Q16626 185 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 DGKKQ5KSL6 1271 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 RHBDF2Q6PJF5 856 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 SASS6Q6UVJ0 657 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 HTR3DQ70Z44 454 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 NDRG1Q92597 394 aaKnown RBP17.55■□□□□ 0.4
APTR-201ENST00000398043 ATOH1Q92858 354 aaPredicted RBP17.55■□□□□ 0.4
APTR-201ENST00000398043 SECISBP2LQ93073 1101 aaKnown RBP17.55■□□□□ 0.4
APTR-201ENST00000398043 OTUB2Q96DC9 234 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 ULBP1Q9BZM6 244 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 HSD3B7Q9H2F3 369 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 ACP6Q9NPH0 428 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 SPATA6Q9NWH7 488 aaPredicted RBP17.55■□□□□ 0.4
APTR-201ENST00000398043 TBC1D14Q9P2M4 693 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 FBXO4Q9UKT5 387 aa17.55■□□□□ 0.4
APTR-201ENST00000398043 KRT5P13647 590 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 PRKCSHP14314 528 aaPredicted RBP17.54■□□□□ 0.4
APTR-201ENST00000398043 HOXD11P31277 338 aaPredicted RBP17.54■□□□□ 0.4
APTR-201ENST00000398043 GPD2P43304 727 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 YWHAGP61981 247 aaKnown RBP eCLIP17.54■□□□□ 0.4
APTR-201ENST00000398043 ADIGQ0VDE8 80 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 LRRC32Q14392 662 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 NCAPHQ15003 741 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 ZNF528Q3MIS6 628 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 Q6ZNB5 142 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 Q6ZS52 159 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 BBS7Q8IWZ6 715 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 ARHGAP18Q8N392 663 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 ZNF606Q8WXB4 792 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 CNGB3Q9NQW8 809 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 FANCLQ9NW38 375 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 DNMT3LQ9UJW3 386 aa17.54■□□□□ 0.4
APTR-201ENST00000398043 M0QYV0 167 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 LAMTOR5O43504 91 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 AMPD2Q01433 879 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 KRT31Q15323 416 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 ARHGAP44Q17R89 818 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 C10orf120Q5SQS8 335 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 SYNPOQ8N3V7 929 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 SPEM1Q8N4L4 309 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 HSFY1Q96LI6 401 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 P2RY13Q9BPV8 354 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 NAA15Q9BXJ9 866 aaKnown RBP17.53■□□□□ 0.4
APTR-201ENST00000398043 LRRC4Q9HBW1 653 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 C2orf42Q9NWW7 574 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 DNAJC12Q9UKB3 198 aa17.53■□□□□ 0.4
APTR-201ENST00000398043 MYO15AQ9UKN7 3530 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 OTOGLQ3ZCN5 2332 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 YJEFN3A6XGL0 299 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 E7ENQ6 273 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 STC2O76061 302 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 EGFP01133 1207 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 IRF1P10914 325 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 CHRM1P11229 460 aaPredicted RBP17.52■□□□□ 0.4
APTR-201ENST00000398043 RALAP11233 206 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 ZNF18P17022 549 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 RGS7P49802 495 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 DAOAP59103 153 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 TYRO3Q06418 890 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 NR1H3Q13133 447 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 DENND1BQ6P3S1 775 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 PKN3Q6P5Z2 889 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 CD101Q93033 1021 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 CDK5RAP1Q96SZ6 601 aaKnown RBP17.52■□□□□ 0.4
APTR-201ENST00000398043 NACA2Q9H009 215 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 TAB2Q9NYJ8 693 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 CYTH4Q9UIA0 394 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 SH3BP1Q9Y3L3 701 aa17.52■□□□□ 0.4
APTR-201ENST00000398043 ZFHX2Q9C0A1 2572 aaPredicted RBP17.52■□□□□ 0.39
APTR-201ENST00000398043 USP34Q70CQ2 3546 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 LRRC10BA6NIK2 292 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 FOXN3O00409 490 aaPredicted RBP17.51■□□□□ 0.39
APTR-201ENST00000398043 LETM1O95202 739 aaPredicted RBP17.51■□□□□ 0.39
APTR-201ENST00000398043 PAPSS2O95340 614 aaPredicted RBP17.51■□□□□ 0.39
APTR-201ENST00000398043 KLKB1P03952 638 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 DRD1P21728 446 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 GNA15P30679 374 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 CLCN1P35523 988 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 MYL5Q02045 173 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 MESP2Q0VG99 397 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 GRSF1Q12849 480 aaKnown RBP eCLIP17.51■□□□□ 0.39
APTR-201ENST00000398043 LY6G5CQ5SRR4 150 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 KLHDC7AQ5VTJ3 777 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 BSPRYQ5W0U4 402 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 APTXQ7Z2E3 356 aaKnown RBP17.51■□□□□ 0.39
APTR-201ENST00000398043 TADA2BQ86TJ2 420 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms