RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 NOX5Q96PH1 765 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 CPXM1Q96SM3 734 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 CDK5RAP1Q96SZ6 601 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 HEBP1Q9NRV9 189 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 GKN1Q9NS71 199 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 TJP2Q9UDY2 1190 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 WNT6Q9Y6F9 365 aa22.23■■□□□ 1.15
TSPAN4-206ENST00000397408 MMEP08473 750 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 PBX1P40424 430 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 MLF2Q15773 248 aaPredicted RBP22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 SLC44A4Q53GD3 710 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 BSPRYQ5W0U4 402 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 TRIM68Q6AZZ1 485 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 HFE2Q6ZVN8 426 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 TMEM110Q86TL2 294 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 ZNF276Q8N554 614 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 TMEM35BQ8NCS4 154 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 CSGALNACT1Q8TDX6 532 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 FAM83CQ9BQN1 747 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 MFSD1Q9H3U5 465 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 TRPV5Q9NQA5 729 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 RASAL2Q9UJF2 1139 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 DNMT3LQ9UJW3 386 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 ZDBF2Q9HCK1 2354 aa22.22■■□□□ 1.15
TSPAN4-206ENST00000397408 SCAMP3O14828 347 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 IRF1P10914 325 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 IFNAR2P48551 515 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 TNK2Q07912 1038 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 EFEMP1Q12805 493 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 ZNF677Q86XU0 584 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 MIB1Q86YT6 1006 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 SCUBE3Q8IX30 993 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 OSCP1Q8WVF1 389 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 EDEM1Q92611 657 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 PBXIP1Q96AQ6 731 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 PPP1R13BQ96KQ4 1090 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 KLF16Q9BXK1 252 aaPredicted RBP22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 XPO4Q9C0E2 1151 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 EBF3Q9H4W6 596 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 DUS2Q9NX74 493 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 GTSE1Q9NYZ3 720 aa22.21■■□□□ 1.15
TSPAN4-206ENST00000397408 COL4A3Q01955 1670 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 F5P12259 2224 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 FAM170AA1A519 330 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 PRR33A8MZF0 331 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 PAPSS1O43252 624 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 SART1O43290 800 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 LTFP02788 710 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 TPM3P06753 285 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 CDH5P33151 784 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 CDR2Q01850 454 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 PDGFRLQ15198 375 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 PTPN20Q4JDL3 420 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 TPRG1Q6ZUI0 275 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 TTC8Q8TAM2 541 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 IPO4Q8TEX9 1081 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 RNF139Q8WU17 664 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 GOLGA1Q92805 767 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 FAM149B1Q96BN6 582 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 TTYH3Q9C0H2 523 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 HPS4Q9NQG7 708 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 ABCC13Q9NSE7 274 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 MYO6Q9UM54 1294 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 SH3BP1Q9Y3L3 701 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 PIAS3Q9Y6X2 628 aa22.2■■□□□ 1.14
TSPAN4-206ENST00000397408 LRRC53A6NM62 1247 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 LSM8O95777 96 aaKnown RBP22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 ARSAP15289 507 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 FERP16591 822 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 FMO1Q01740 532 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 PRKCQQ04759 706 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 GOLGA8FQ08AF8 430 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 GOLGA8DPQ0D2H9 430 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 BMP8AQ7Z5Y6 402 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 FLCNQ8NFG4 579 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 WBP2Q969T9 261 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 SYNCQ9H7C4 482 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 TBC1D17Q9HA65 648 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 OLA1Q9NTK5 396 aaKnown RBP22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 MARCH2Q9P0N8 246 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 STRIP2Q9ULQ0 834 aa22.19■■□□□ 1.14
TSPAN4-206ENST00000397408 E2F8A0AVK6 867 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 CBFA2T2O43439 604 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 ERBB2P04626 1255 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 CHRNB2P17787 502 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 KPNA1P52294 538 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 ITPRIPL2Q3MIP1 535 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 FIGNQ5HY92 759 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 NAA35Q5VZE5 725 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 FMNL3Q8IVF7 1028 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 KIAA1958Q8N8K9 716 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 ATP2A3Q93084 1043 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 SHDQ96IW2 340 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 NUP58Q9BVL2 599 aa22.18■■□□□ 1.14
TSPAN4-206ENST00000397408 STK25O00506 426 aa22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 CCDC172P0C7W6 258 aa22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 SOX9P48436 509 aa22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 SNX16P57768 344 aa22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 NOMO3P69849 1222 aa22.17■■□□□ 1.14
TSPAN4-206ENST00000397408 RUNX3Q13761 415 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms