RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 AGMOQ6ZNB7 445 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 KBTBD7Q8WVZ9 684 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 KRT35Q92764 455 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 ZMYM5Q9UJ78 669 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 RWDD3Q9Y3V2 267 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 STX16-NPEPL1H3BU86 382 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 STX16O14662 325 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 KLHL41O60662 606 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 CST8O60676 142 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 KCNH1O95259 989 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 MED26O95402 600 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 BCL10O95999 233 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 SERPINA3P01011 423 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 S100A1P23297 94 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 MAGEA4P43358 317 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 NAA30Q147X3 362 aaPredicted RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 TAF2Q6P1X5 1199 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 STOML2Q9UJZ1 356 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 ATP10DQ9P241 1426 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 SPANXN2Q5MJ10 180 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 ADGRF4Q8IZF3 695 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 CCT8L2Q96SF2 557 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 SENP6Q9GZR1 1112 aaPredicted RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 SNX4O95219 450 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 BOP1Q14137 746 aaKnown RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 SV2CQ496J9 727 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 PTAR1Q7Z6K3 402 aaPredicted RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 UNC5CLQ8IV45 518 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 PROM2Q8N271 834 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 EEF1AKMT1Q8WVE0 214 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 DDIT4Q9NX09 232 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 A0A1W2PP64 1363 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 CKBP12277 381 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 PRG2P13727 222 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 ZNF37AP17032 561 aaPredicted RBP12.68□□□□□ -0.38
SMU1-201ENST00000397149 PARP8Q8N3A8 854 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 UBP1Q9NZI7 540 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.384e-8■■■■□ 23
SMU1-201ENST00000397149 H7C0S8 307 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 CBX4O00257 560 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 ZBTB22O15209 634 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 MSH3P20585 1137 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 NAPEPLDQ6IQ20 393 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 MRNIPQ6NTE8 343 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 OXER1Q8TDS5 423 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 SEPT1Q8WYJ6 367 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 KCNB2Q92953 911 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 MIR1-1HGQ9H1L0 117 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 EPB41L4AQ9HCS5 686 aaPredicted RBP12.68□□□□□ -0.38
SMU1-201ENST00000397149 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMU1-201ENST00000397149 DDX18Q9NVP1 670 aaKnown RBP12.68□□□□□ -0.38
SMU1-201ENST00000397149 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMU1-201ENST00000397149 EHD3Q9NZN3 535 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 PAK5Q9P286 719 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 VHLP40337 213 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 TRAF3Q13114 568 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 DGCR6Q14129 220 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 RASSF6Q6ZTQ3 369 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 ENOSF1Q7L5Y1 443 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 FAM9CQ8IZT9 166 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 PHF21BQ96EK2 531 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 DGCR6LQ9BY27 220 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 DSN1Q9H410 356 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 CXorf56Q9H5V9 222 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 HAO1Q9UJM8 370 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 PHF2O75151 1096 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 ZC3H11AO75152 810 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMU1-201ENST00000397149 TDP2O95551 362 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 CTSEP14091 401 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 PHKG2P15735 406 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 SP100P23497 879 aaPredicted RBP12.68□□□□□ -0.38
SMU1-201ENST00000397149 OMPP47874 163 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 MTMR2Q13614 643 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 ZNF846Q147U1 533 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 TBCELQ5QJ74 424 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 LPCAT2Q7L5N7 544 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 SLAIN2Q9P270 581 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 RPS6KA6Q9UK32 745 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 BLMP54132 1417 aaPredicted RBP12.68□□□□□ -0.38
SMU1-201ENST00000397149 CHL1O00533 1208 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 AGTP01019 485 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 GPD1P21695 349 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 ITGA8P53708 1063 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 CYP4F2P78329 520 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 CYP4F3Q08477 520 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 ZBTB49Q6ZSB9 765 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 NT5C1AQ9BXI3 368 aa12.68□□□□□ -0.38
SMU1-201ENST00000397149 FAM200BP0CF97 657 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 THPOP40225 353 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 CBX5P45973 191 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 CSHL1Q14406 222 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 ACOX1Q15067 660 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 EML3Q32P44 896 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 CBWD3Q5JTY5 395 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 CBWD5Q5RIA9 395 aa12.67□□□□□ -0.38
SMU1-201ENST00000397149 PJA1Q8NG27 643 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms