RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 RPAP3Q9H6T3 665 aaPredicted RBP24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 RHBDL2Q9NX52 303 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 NDUFA13Q9P0J0 144 aa24.92■■□□□ 1.58
CSNK1E-203ENST00000396832 C3orf70A6NLC5 250 aaPredicted RBP24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 PLA2G6O60733 806 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 TMCC1O94876 653 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 PEX2P28328 305 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 CPOXP36551 454 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 SPDYE2Q495Y8 402 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 CES4AQ5XG92 561 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 DENND1BQ6P3S1 775 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 RSBN1LQ6PCB5 846 aaPredicted RBP24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 SLC44A1Q8WWI5 657 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 E2F7Q96AV8 911 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 SOX13Q9UN79 622 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 STK10O94804 968 aaKnown RBP24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 CALB1P05937 261 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 KCNA2P16389 499 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 CHN2P52757 468 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 PTPN20Q4JDL3 420 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 PPM1NQ8N819 430 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 CYTH4Q9UIA0 394 aa24.91■■□□□ 1.58
CSNK1E-203ENST00000396832 PSAPP07602 524 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 C6orf222P0C671 652 aaPredicted RBP24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 RGS2P41220 211 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 EIF3EP60228 445 aaKnown RBP24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 TFAMQ00059 246 aaKnown RBP24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 OLFML2BQ68BL8 750 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 CGRRF1Q99675 332 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 PDGFDQ9GZP0 370 aaPredicted RBP24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 PPME1Q9Y570 386 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 UGT1A9O60656 530 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 CLDN10P78369 228 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 CHI3L2Q15782 390 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 ATG16L1Q676U5 607 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 KCTD6Q8NC69 237 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 TMEM35BQ8NCS4 154 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 DEFB129Q9H1M3 183 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 EPB41L1Q9H4G0 881 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 UGT1A7Q9HAW7 530 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 UGT1A10Q9HAW8 530 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 UGT1A8Q9HAW9 530 aa24.9■■□□□ 1.58
CSNK1E-203ENST00000396832 RBP3P10745 1247 aa24.89■■□□□ 1.58
CSNK1E-203ENST00000396832 TBXAS1P24557 533 aaPredicted RBP24.89■■□□□ 1.58
CSNK1E-203ENST00000396832 SH3PXD2AQ5TCZ1 1133 aa24.89■■□□□ 1.58
CSNK1E-203ENST00000396832 ZCCHC23Q6ZST2 131 aa24.89■■□□□ 1.58
CSNK1E-203ENST00000396832 C17orf75Q9HAS0 396 aa24.89■■□□□ 1.58
CSNK1E-203ENST00000396832 PDLIM7Q9NR12 457 aa24.89■■□□□ 1.58
CSNK1E-203ENST00000396832 PTTG2Q9NZH5 202 aa24.89■■□□□ 1.58
CSNK1E-203ENST00000396832 CNTNAP2Q9UHC6 1331 aa24.89■■□□□ 1.58
CSNK1E-203ENST00000396832 TCRBV5S1A1TA0A578 114 aa24.89■■□□□ 1.57
CSNK1E-203ENST00000396832 F5H423 210 aaPredicted RBP24.89■■□□□ 1.57
CSNK1E-203ENST00000396832 KRT3P12035 628 aa24.89■■□□□ 1.57
CSNK1E-203ENST00000396832 CCND2P30279 289 aa24.89■■□□□ 1.57
CSNK1E-203ENST00000396832 ITGA9Q13797 1035 aa24.89■■□□□ 1.57
CSNK1E-203ENST00000396832 TBCCQ15814 346 aa24.89■■□□□ 1.57
CSNK1E-203ENST00000396832 UGT2A3Q6UWM9 527 aa24.89■■□□□ 1.57
CSNK1E-203ENST00000396832 SPATA18Q8TC71 538 aa24.89■■□□□ 1.57
CSNK1E-203ENST00000396832 GMEB1Q9Y692 573 aa24.89■■□□□ 1.57
CSNK1E-203ENST00000396832 VILLO15195 856 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 PEX10O60683 326 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 SERPINA6P08185 405 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 SLC25A11Q02978 314 aaKnown RBP24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 CDO1Q16878 200 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 ACBD5Q5T8D3 534 aaPredicted RBP24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 MIPOL1Q8TD10 442 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 ARID2Q68CP9 1835 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 TRIM49D1C9J1S8 452 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 WDR46O15213 610 aaKnown RBP24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 SORBS2O94875 1100 aaKnown RBP24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 SP2Q02086 613 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 PIGHQ14442 188 aaPredicted RBP24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 ANKRD20A4Q4UJ75 823 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 RALGPS1Q5JS13 557 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 MAP3K21Q5TCX8 1036 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 SNRNP48Q6IEG0 339 aaKnown RBP24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 C1orf228Q6PIY5 440 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 RBM44Q6ZP01 1051 aaKnown RBP24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 CRLF3Q8IUI8 442 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 TRIM42Q8IWZ5 723 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 EBF4Q9BQW3 602 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 EPHB1P54762 984 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 CDH8P55286 799 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 PSMC1P62191 440 aaKnown RBP24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 XIAPP98170 497 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 CCNIQ14094 377 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 TRIP10Q15642 601 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 LRRC38Q5VT99 294 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 FBXL19Q6PCT2 694 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 VSIG10LQ86VR7 867 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 PLLPQ9Y342 182 aa24.88■■□□□ 1.57
CSNK1E-203ENST00000396832 CXorf49A8MYA2 514 aaPredicted RBP24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 KRT19P08727 400 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 KDELR1P24390 212 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 TPP2P29144 1249 aaPredicted RBP24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 TMEM259Q4ZIN3 620 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 HIPK4Q8NE63 616 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 USP6NLQ92738 828 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 PRICKLE1Q96MT3 831 aaPredicted RBP24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 C20orf27Q9GZN8 174 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms