RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 EPHB2P29323 1055 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 PNKPQ96T60 521 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 THAP2Q9H0W7 228 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 DUSP12Q9UNI6 340 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 RBP1P09455 135 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 PDK2Q15119 407 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 DGKDQ16760 1214 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 ERGIC2Q96RQ1 377 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 C1orf50Q9BV19 199 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 CYP4F12Q9HCS2 524 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 KCNH4Q9UQ05 1017 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 MYRFQ9Y2G1 1151 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 TRPM1Q7Z4N2 1603 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 CPSF4O95639 269 aaKnown RBP14.39□□□□□ -0.11
COL4A3-202ENST00000396578 PDHBP11177 359 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 CDK20Q8IZL9 346 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 KCTD17Q8N5Z5 321 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 NEDD1Q8NHV4 660 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 LRRC40Q9H9A6 602 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 TPRKBQ9Y3C4 175 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 UBOX5O94941 541 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 CCT3P49368 545 aaKnown RBP14.39□□□□□ -0.11
COL4A3-202ENST00000396578 WASHC2DQ5SRD0 308 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 GDPD5Q8WTR4 605 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 DDX18Q9NVP1 670 aaKnown RBP14.39□□□□□ -0.11
COL4A3-202ENST00000396578 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
COL4A3-202ENST00000396578 ITGA4P13612 1032 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 VCLP18206 1134 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 YWHAQP27348 245 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 ITGA9Q13797 1035 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 AGKQ53H12 422 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 PMF1Q6P1K2 205 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 CYLDQ9NQC7 956 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 DRG1Q9Y295 367 aaKnown RBP14.39□□□□□ -0.11
COL4A3-202ENST00000396578 TMA7Q9Y2S6 64 aaKnown RBP14.39□□□□□ -0.11
COL4A3-202ENST00000396578 PABPC1P11940 636 aaKnown RBP14.39□□□□□ -0.11
COL4A3-202ENST00000396578 EXOSC10Q01780 885 aaKnown RBP14.39□□□□□ -0.11
COL4A3-202ENST00000396578 NEDD8Q15843 81 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 STARD13Q9Y3M8 1113 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 SNX8Q9Y5X2 465 aa14.39□□□□□ -0.11
COL4A3-202ENST00000396578 MMP10P09238 476 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 PPIDQ08752 370 aaKnown RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 TCHHL1Q5QJ38 904 aaPredicted RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 SYTL1Q8IYJ3 562 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 SETD9Q8NE22 299 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 EXD1Q8NHP7 514 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 CLPBQ9H078 707 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 PIM2Q9P1W9 311 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 TET3O43151 1660 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 BAIAP3O94812 1187 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 TDRD10Q5VZ19 366 aaKnown RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 CDC73Q6P1J9 531 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 NOTUMQ6P988 496 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 ERO1BQ86YB8 467 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 DCP1BQ8IZD4 617 aaKnown RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 QKIQ96PU8 341 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 KLHL1Q9NR64 748 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 DYRK1BQ9Y463 629 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 GOLGA4Q13439 2230 aaKnown RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 TMEM114B3SHH9 223 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 CYP2C8P10632 490 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 PNPLA4P41247 253 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 SLC1A6P48664 564 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 NYAP1Q6ZVC0 841 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 IARS2Q9NSE4 1012 aaKnown RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 ADARP55265 1226 aaKnown RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 C11orf63Q6NUN7 778 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 ELOA2Q8IYF1 753 aaPredicted RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 GPRASP2Q96D09 838 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 PAFAH2Q99487 392 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 ADI1Q9BV57 179 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 SLITRK2Q9H156 845 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 COL15A1P39059 1388 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 PLA2G6O60733 806 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 MPOP05164 745 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 CUL2Q13617 745 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 CCDC153Q494R4 210 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 FAM228AQ86W67 206 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 FAM120BQ96EK7 910 aaKnown RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 ERBB3P21860 1342 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 ADCY10Q96PN6 1610 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 NDUFB5O43674 189 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 GRK4P32298 578 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 HK2P52789 917 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 PRKCEQ02156 737 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 SLC25A24Q6NUK1 477 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 ACTRT1Q8TDG2 376 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 ACSF2Q96CM8 615 aaPredicted RBP14.38□□□□□ -0.11
COL4A3-202ENST00000396578 SH2D3AQ9BRG2 576 aa14.38□□□□□ -0.11
COL4A3-202ENST00000396578 PAICSP22234 425 aaKnown RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 SLC34A1Q06495 639 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 MTMR2Q13614 643 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 OR6Y1Q8NGX8 325 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 OSCP1Q8WVF1 389 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 SLC24A2Q9UI40 661 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 CDC42BPAQ5VT25 1732 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 EPHA10Q5JZY3 1008 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 LPAR1Q92633 364 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms