RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PHOSPHO2Q8TCD6 241 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 PGLYRP2Q96PD5 576 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 YME1L1Q96TA2 773 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 DDX47Q9H0S4 455 aaKnown RBP13.28□□□□□ -0.28
TRIM39-204ENST00000396548 MTMR10Q9NXD2 777 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 PCYOX1Q9UHG3 505 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 R3HDM2Q9Y2K5 976 aaKnown RBP13.28□□□□□ -0.28
TRIM39-204ENST00000396548 CDY1Q9Y6F8 540 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 SSR1P43307 286 aaKnown RBP13.28□□□□□ -0.28
TRIM39-204ENST00000396548 USP46P62068 366 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 ROR1Q01973 937 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 CDO1Q16878 200 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 RIN2Q8WYP3 895 aaPredicted RBP13.28□□□□□ -0.28
TRIM39-204ENST00000396548 SEC14L1Q92503 715 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 WDR6Q9NNW5 1121 aaKnown RBP13.28□□□□□ -0.28
TRIM39-204ENST00000396548 SCML2Q9UQR0 700 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 CHD9Q3L8U1 2897 aa13.27□□□□□ -0.28
TRIM39-204ENST00000396548 GJC1P36383 396 aa13.27□□□□□ -0.28
TRIM39-204ENST00000396548 BOLA3Q53S33 107 aa13.27□□□□□ -0.28
TRIM39-204ENST00000396548 DCAF6Q58WW2 860 aa13.27□□□□□ -0.28
TRIM39-204ENST00000396548 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.28
TRIM39-204ENST00000396548 HERC6Q8IVU3 1022 aa13.27□□□□□ -0.28
TRIM39-204ENST00000396548 FAF2Q96CS3 445 aa13.27□□□□□ -0.28
TRIM39-204ENST00000396548 GDF3Q9NR23 364 aa13.27□□□□□ -0.28
TRIM39-204ENST00000396548 HSFX1Q9UBD0 423 aa13.27□□□□□ -0.28
TRIM39-204ENST00000396548 ZNF487B1APH4 448 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 KRT10P13645 584 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 TNFRSF8P28908 595 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 VSNL1P62760 191 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 MRPS25P82663 173 aaKnown RBP13.27□□□□□ -0.29
TRIM39-204ENST00000396548 DPYSL3Q14195 570 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 CA9Q16790 459 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 KLHL7Q8IXQ5 586 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 NUP93Q8N1F7 819 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 CCDC185Q8N715 623 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 SLCO2A1Q92959 643 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 SNRNP25Q9BV90 132 aaKnown RBP13.27□□□□□ -0.29
TRIM39-204ENST00000396548 OSER1Q9NX31 292 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 FZD10Q9ULW2 581 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 INSL6Q9Y581 213 aa13.27□□□□□ -0.29
TRIM39-204ENST00000396548 I6L893 689 aaPredicted RBP13.26□□□□□ -0.29
TRIM39-204ENST00000396548 SYN1P17600 705 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 RPL17P18621 184 aaKnown RBP13.26□□□□□ -0.29
TRIM39-204ENST00000396548 ATF6P18850 670 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 GLUD2P49448 558 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 SULT1E1P49888 294 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 SLC7A5Q01650 507 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 DPYSL2Q16555 572 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 ARTNQ5T4W7 220 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 BSPRYQ5W0U4 402 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 C8orf74Q6P047 294 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 CEP295NLQ96MC4 621 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 SLC9A7Q96T83 725 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 HEMGNQ9BXL5 484 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 DCLK3Q9C098 648 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 NMUR1Q9HB89 426 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 NGRNQ9NPE2 291 aaKnown RBP13.26□□□□□ -0.29
TRIM39-204ENST00000396548 ANLNQ9NQW6 1124 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 PIGVQ9NUD9 493 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 COMMD8Q9NX08 183 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 PRPSAP2O60256 369 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 SOAT2O75908 522 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 CPB1P15086 417 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 L1CAMP32004 1257 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 CHRNA3P32297 505 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 ZC3H12AQ5D1E8 599 aaKnown RBP13.26□□□□□ -0.29
TRIM39-204ENST00000396548 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 SDHAF4Q5VUM1 108 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 STKLD1Q8NE28 680 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 MAIP1Q8WWC4 291 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 FAM149B1Q96BN6 582 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 RAD9AQ99638 391 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 MAGEB5Q9BZ81 275 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 ZBP1Q9H171 429 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 RRN3Q9NYV6 651 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 STIM2Q9P246 746 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 AMACRQ9UHK6 382 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 SLC27A5Q9Y2P5 690 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 NEU2Q9Y3R4 380 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 ZBBXA8MT70 800 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 SEC24AO95486 1093 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 OR1D2P34982 312 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 COILP38432 576 aaPredicted RBP13.26□□□□□ -0.29
TRIM39-204ENST00000396548 YWHAGP61981 247 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRIM39-204ENST00000396548 LLGL1Q15334 1064 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 SPOUT1Q5T280 376 aaKnown RBP13.26□□□□□ -0.29
TRIM39-204ENST00000396548 PSTKQ8IV42 348 aaKnown RBP13.26□□□□□ -0.29
TRIM39-204ENST00000396548 CCDC50Q8IVM0 306 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 HSPH1Q92598 858 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 TMEM169Q96HH4 297 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 RXFP1Q9HBX9 757 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 PCDH18Q9HCL0 1135 aa13.26□□□□□ -0.29
TRIM39-204ENST00000396548 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRIM39-204ENST00000396548 LRRD1A4D1F6 860 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 LCHNA4D1U4 455 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
TRIM39-204ENST00000396548 PPM1AP35813 382 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 FNTAP49354 379 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 PDK2Q15119 407 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 DRICH1Q6PGQ1 229 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms