RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.8■□□□□ 0.28
SNX6-202ENST00000396526 POC1B-GALNT4F8VUJ3 575 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 KCNN4O15554 427 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 IBSPP21815 317 aaPredicted RBP16.8■□□□□ 0.28
SNX6-202ENST00000396526 CYP2F1P24903 491 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 SULT1E1P49888 294 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 DPYSL2Q16555 572 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 SLC25A52Q3SY17 297 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 BBS9Q3SYG4 887 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 DCAF6Q58WW2 860 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 MDH1BQ5I0G3 518 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 RNF180Q86T96 592 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 SRLQ86TD4 932 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 TADA2BQ86TJ2 420 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 OSTM1Q86WC4 334 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 FUKQ8N0W3 1084 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 CENPIQ92674 756 aaPredicted RBP16.8■□□□□ 0.28
SNX6-202ENST00000396526 SLC24A2Q9UI40 661 aa16.8■□□□□ 0.28
SNX6-202ENST00000396526 FARP1Q9Y4F1 1045 aaPredicted RBP16.8■□□□□ 0.28
SNX6-202ENST00000396526 HCRTO43612 131 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 ZNF623O75123 536 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 TSHRP16473 764 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 KRT15P19012 456 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 ACAT1P24752 427 aaKnown RBP16.79■□□□□ 0.28
SNX6-202ENST00000396526 NKX3-2P78367 333 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 MRPS5P82675 430 aaKnown RBP16.79■□□□□ 0.28
SNX6-202ENST00000396526 PRKCZQ05513 592 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 KCNA10Q16322 511 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 KLHL38Q2WGJ6 581 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 CACNA2D3Q8IZS8 1091 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 DEFB106AQ8N104 65 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 NRDE2Q9H7Z3 1164 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 CDH9Q9ULB4 789 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 RASA4BC9J798 803 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 GABRDO14764 452 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 RASA4O43374 803 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 CHRNA1P02708 482 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 GDF10P55107 478 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 CACNB2Q08289 660 aaPredicted RBP16.79■□□□□ 0.28
SNX6-202ENST00000396526 XRCC4Q13426 336 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 ANKS4BQ8N8V4 417 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 NAT8LQ8N9F0 302 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 C10orf88Q9H8K7 445 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 GGA2Q9UJY4 613 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 PADI3Q9ULW8 664 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 IKBKGQ9Y6K9 419 aa16.79■□□□□ 0.28
SNX6-202ENST00000396526 ARL5CA6NH57 179 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 DAB1O75553 588 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 ZNF189O75820 626 aaPredicted RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 STK10O94804 968 aaKnown RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 VIMP08670 466 aaKnown RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 ODC1P11926 461 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 NOGQ13253 232 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 TMED2Q15363 201 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 SLC9A4Q6AI14 798 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 NPNTQ6UXI9 565 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 CABS1Q96KC9 395 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 LRRC4CQ9HCJ2 640 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 SAMD15Q9P1V8 674 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 RCOR3Q9P2K3 495 aaPredicted RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 PTCH2Q9Y6C5 1203 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 BCLAF3A2AJT9 711 aaKnown RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 H3BRJ5 948 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 CTGFP29279 349 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 SCNN1GP51170 649 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 PDZD4Q76G19 769 aaPredicted RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 MRPL10Q7Z7H8 261 aaKnown RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 TDRPQ86YL5 185 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 TAB3Q8N5C8 712 aaPredicted RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 OTUD6BQ8N6M0 293 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 PCDH19Q8TAB3 1148 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 ARHGAP39Q9C0H5 1083 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 RAB6BQ9NRW1 208 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 DSEQ9UL01 958 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 GOLGA6L7A0A1B0GV03 622 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 TMEM120BA0PK00 339 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 CHADO15335 359 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 SPAG6O75602 509 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 AP1G2O75843 785 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 GHRP10912 638 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 PRKAR2AP13861 404 aaKnown RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 SP3Q02447 781 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 UBAP2Q5T6F2 1119 aaKnown RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 CYP4V2Q6ZWL3 525 aaPredicted RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 SRRM1Q8IYB3 904 aaKnown RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
SNX6-202ENST00000396526 CLEC4CQ8WTT0 213 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 KRT82Q9NSB4 513 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 FAM169AQ9Y6X4 670 aa16.78■□□□□ 0.28
SNX6-202ENST00000396526 ADAMTS4O75173 837 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 ATP2C2O75185 946 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 TKTL1P51854 596 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 HP1BP3Q5SSJ5 553 aaPredicted RBP16.77■□□□□ 0.28
SNX6-202ENST00000396526 CAPN12Q6ZSI9 719 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 LPPQ93052 612 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 POPDC2Q9HBU9 364 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 RRN3Q9NYV6 651 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 CD52P31358 61 aa16.77■□□□□ 0.28
SNX6-202ENST00000396526 L1CAMP32004 1257 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms