RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NFE2L3Q9Y4A8 694 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 MYO16Q9Y6X6 1858 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 SPEGQ15772 3267 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 IGHV1OR15-9A0A0B4J2B8 117 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 A0A1W2PQF6 199 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 NPC1O15118 1278 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 TLR5O60602 858 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 STK38Q15208 465 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 BMT2Q1RMZ1 405 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 WDR45BQ5MNZ6 344 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 FAM173BQ6P4H8 233 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 KLHDC10Q6PID8 442 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 MINDY1Q8N5J2 469 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 SCFD1Q8WVM8 642 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 ZNF516Q92618 1163 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 ZNF419Q96HQ0 510 aaPredicted RBP18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 GABRG3Q99928 467 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 CCSER2Q9H7U1 834 aa18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 DNAJC17Q9NVM6 304 aaKnown RBP18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 RALYQ9UKM9 306 aaKnown RBP18.52■□□□□ 0.56
EXOSC3-202ENST00000396521 SPAARA0A1B0GVQ0 90 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 EXOC3O60645 756 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 NDUFS2O75306 463 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 AP1G2O75843 785 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 RPN1P04843 607 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 ATP5C1P36542 298 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 CLDN10P78369 228 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 BIRC3Q13489 604 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 ZNF699Q32M78 642 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 LRSAM1Q6UWE0 723 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 UNC13DQ70J99 1090 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 METTL3Q86U44 580 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 UNC93AQ86WB7 457 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 CRYBG2Q8N1P7 616 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 LINC00301Q8NCQ3 95 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 IPO4Q8TEX9 1081 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 TMEM174Q8WUU8 243 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 TAF4BQ92750 862 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 HPS3Q969F9 1004 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 BBS2Q9BXC9 721 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 DNAI2Q9GZS0 605 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 CSNK1G1Q9HCP0 422 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 CYLDQ9NQC7 956 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 GMIPQ9P107 970 aa18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 TFIP11Q9UBB9 837 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-202ENST00000396521 ANKRD11Q6UB99 2663 aaPredicted RBP18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 PVALEFA0A1B0GWK0 134 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 CLIC2O15247 247 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 SPTLC2O15270 562 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 EHHADHQ08426 723 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 NCOA4Q13772 614 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 KNOP1Q1ED39 458 aaKnown RBP18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 SGSM1Q2NKQ1 1148 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 KIAA1211LQ6NV74 962 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 PAQR9Q6ZVX9 377 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 RAB44Q7Z6P3 723 aaPredicted RBP18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 TADA2BQ86TJ2 420 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 FUKQ8N0W3 1084 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 TRIML1Q8N9V2 468 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 CD248Q9HCU0 757 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 ZDHHC4Q9NPG8 344 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 KRT82Q9NSB4 513 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 KLK13Q9UKR3 277 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 PCDHB9Q9Y5E1 797 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 PI4KAP42356 2102 aa18.5■□□□□ 0.55
EXOSC3-202ENST00000396521 DMXL2Q8TDJ6 3036 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 ATXN2Q99700 1313 aaKnown RBP18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 PTPRDP23468 1912 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 CD59P13987 128 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 TYRP14679 529 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 NDUFV2P19404 249 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 PLA2G4AP47712 749 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 PSEN1P49768 467 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 RGL4Q8IZJ4 473 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 ZNF276Q8N554 614 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 PARD3BQ8TEW8 1205 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 DHX58Q96C10 678 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 HSPA12BQ96MM6 686 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 KLF16Q9BXK1 252 aaPredicted RBP18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 GZF1Q9H116 711 aaPredicted RBP18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 SMYD3Q9H7B4 428 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 PNPLA8Q9NP80 782 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 LHX6Q9UPM6 363 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 SCML2Q9UQR0 700 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 MTMR6Q9Y217 621 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 ZNF510Q9Y2H8 683 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 FASNP49327 2511 aaKnown RBP18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 PLXND1Q9Y4D7 1925 aa18.49■□□□□ 0.55
EXOSC3-202ENST00000396521 DSPP15924 2871 aaKnown RBP18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 AKAP13Q12802 2813 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 NEDD8-MDP1E9PL57 170 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 CUTAO60888 179 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 CLSTN1O94985 981 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 PDIA4P13667 645 aaKnown RBP18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 CDH8P55286 799 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 COL9A2Q14055 689 aaPredicted RBP18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 STARD3Q14849 445 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 ACAP1Q15027 740 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 TRIP6Q15654 476 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms