RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 KLHL10Q6JEL2 608 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 HTR3DQ70Z44 454 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 ERMP1Q7Z2K6 904 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 DGLUCYQ7Z3D6 616 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 CACNA2D4Q7Z3S7 1137 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 ALLCQ8N6M5 410 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 ACDQ96AP0 544 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 OTUB2Q96DC9 234 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 DHTKD1Q96HY7 919 aaPredicted RBP19.28■□□□□ 0.68
FXN-203ENST00000396366 ARRDC1-AS1Q9H2J1 176 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 PNPLA8Q9NP80 782 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 ARHGEF4Q9NR80 690 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 SPHK2Q9NRA0 654 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 USP3Q9Y6I4 520 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 SPAG17Q6Q759 2223 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 A0A0A0MRY4 1105 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 TULP2O00295 520 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 PSMA7O14818 248 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 TULP3O75386 442 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 APODP05090 189 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 ATXN1P54253 815 aaKnown RBP19.27■□□□□ 0.68
FXN-203ENST00000396366 LMNB2Q03252 620 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 C10orf120Q5SQS8 335 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 ARHGAP17Q68EM7 881 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 TMEM92Q6UXU6 159 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 PIGZQ86VD9 579 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 TTC30AQ86WT1 665 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 ETFBKMTQ8IXQ9 262 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 ELOA2Q8IYF1 753 aaPredicted RBP19.27■□□□□ 0.68
FXN-203ENST00000396366 TXNDC5Q8NBS9 432 aaKnown RBP19.27■□□□□ 0.68
FXN-203ENST00000396366 TSTD1Q8NFU3 115 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 FAXDC2Q96IV6 333 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 TPSD1Q9BZJ3 242 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 EBF1Q9UH73 591 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 MMP17Q9ULZ9 603 aa19.27■□□□□ 0.68
FXN-203ENST00000396366 SGK1O00141 431 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 GDF9O60383 454 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 KLF8O95600 359 aaPredicted RBP19.26■□□□□ 0.67
FXN-203ENST00000396366 EIF2DP41214 584 aaKnown RBP19.26■□□□□ 0.67
FXN-203ENST00000396366 GRIA2P42262 883 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 KIR2DL1P43626 348 aaPredicted RBP19.26■□□□□ 0.67
FXN-203ENST00000396366 FMO5P49326 533 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 DGKEP52429 567 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 STIM1Q13586 685 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 MORC3Q14149 939 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 CSRP2Q16527 193 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 GOLGA7BQ2TAP0 167 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 TTI2Q6NXR4 508 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 CCDC186Q7Z3E2 898 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 MIB1Q86YT6 1006 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 TTC39CQ8N584 583 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 IL17RCQ8NAC3 791 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 NELFBQ8WX92 580 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 NDRG1Q92597 394 aaKnown RBP19.26■□□□□ 0.67
FXN-203ENST00000396366 P2RY11Q96G91 374 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 DNAI2Q9GZS0 605 aa19.26■□□□□ 0.67
FXN-203ENST00000396366 MED19A0JLT2 244 aaPredicted RBP19.25■□□□□ 0.67
FXN-203ENST00000396366 PRR5-ARHGAP8B1AHC4 643 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 HOXC11O43248 304 aaPredicted RBP19.25■□□□□ 0.67
FXN-203ENST00000396366 PLA2G4AP47712 749 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 STX17P56962 302 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 MRPS21P82921 87 aaKnown RBP19.25■□□□□ 0.67
FXN-203ENST00000396366 ARHGAP8P85298 464 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 CRY1Q16526 586 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 PLK5Q496M5 336 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 BTBD8Q5XKL5 378 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 ANO7Q6IWH7 933 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 PRR23CQ6ZRP0 262 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 TPGS1Q6ZTW0 290 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 UBR7Q8N806 425 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 ANKRD52Q8NB46 1076 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 CCDC26Q8TAB7 109 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 GTPBP4Q9BZE4 634 aaKnown RBP19.25■□□□□ 0.67
FXN-203ENST00000396366 DUSP15Q9H1R2 295 aaPredicted RBP19.25■□□□□ 0.67
FXN-203ENST00000396366 SMOC1Q9H4F8 434 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 DNMT3LQ9UJW3 386 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 HCN2Q9UL51 889 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 CTNND2Q9UQB3 1225 aa19.25■□□□□ 0.67
FXN-203ENST00000396366 MYO18AQ92614 2054 aaKnown RBP19.24■□□□□ 0.67
FXN-203ENST00000396366 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.24■□□□□ 0.67
FXN-203ENST00000396366 TBC1D3BA6NDS4 549 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.24■□□□□ 0.67
FXN-203ENST00000396366 NEDD8-MDP1E9PL57 170 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 LRP3O75074 770 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 ADAM23O75077 832 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 CALCAP01258 141 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 KLKB1P03952 638 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 HMBSP08397 361 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 TNFRSF4P43489 277 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 TKTL1P51854 596 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 FOXK2Q01167 660 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 PDE4CQ08493 712 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 EFEMP1Q12805 493 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 SF3A2Q15428 464 aaKnown RBP19.24■□□□□ 0.67
FXN-203ENST00000396366 CCDC40Q4G0X9 1142 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 RAB41Q5JT25 222 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 KLHDC10Q6PID8 442 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 RASSF3Q86WH2 238 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 MDGA1Q8NFP4 955 aa19.24■□□□□ 0.67
FXN-203ENST00000396366 UBA3Q8TBC4 463 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms