RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 KLRG1Q96E93 195 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 FRMD8Q9BZ67 464 aaPredicted RBP16.32■□□□□ 0.2
HOXA3-202ENST00000396352 INO80BQ9C086 356 aaPredicted RBP16.32■□□□□ 0.2
HOXA3-202ENST00000396352 LACTBL1A8MY62 500 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 PDGFRAP16234 1089 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 OSBPP22059 807 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 SLC34A1Q06495 639 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 CCDC6Q16204 474 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 CDO1Q16878 200 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 GPR20Q99678 358 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 LBHD1Q9BQE6 289 aaPredicted RBP16.32■□□□□ 0.2
HOXA3-202ENST00000396352 ZNF395Q9H8N7 513 aaPredicted RBP16.32■□□□□ 0.2
HOXA3-202ENST00000396352 ETNK2Q9NVF9 386 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 UTRNP46939 3433 aa16.32■□□□□ 0.2
HOXA3-202ENST00000396352 SLC15A5A6NIM6 579 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 GPR25O00155 361 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 CSH1P0DML2 217 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 CSH2P0DML3 217 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 TGFB3P10600 412 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 BMPR2Q13873 1038 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 LRRC74BQ6ZQY2 392 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 ARMC2Q8NEN0 867 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 SYT15Q9BQS2 421 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 STX18Q9P2W9 335 aaKnown RBP16.31■□□□□ 0.2
HOXA3-202ENST00000396352 TNFSF13BQ9Y275 285 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 ZSWIM8A7E2V4 1837 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 HMX2A2RU54 273 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 CYB561D2O14569 222 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 TRDMT1O14717 391 aaKnown RBP16.31■□□□□ 0.2
HOXA3-202ENST00000396352 PRPSAP2O60256 369 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 LGR5O75473 907 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 VDRP11473 427 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 CPA2P48052 419 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 RAP1GDS1P52306 607 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 KLC1Q07866 573 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.31■□□□□ 0.2
HOXA3-202ENST00000396352 SCG3Q8WXD2 468 aaKnown RBP16.31■□□□□ 0.2
HOXA3-202ENST00000396352 CAMKK2Q96RR4 588 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 TRIM56Q9BRZ2 755 aaKnown RBP16.31■□□□□ 0.2
HOXA3-202ENST00000396352 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.31■□□□□ 0.2
HOXA3-202ENST00000396352 GPATCH2LQ9NWQ4 482 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 EVPLQ92817 2033 aa16.31■□□□□ 0.2
HOXA3-202ENST00000396352 BCLAF3A2AJT9 711 aaKnown RBP16.3■□□□□ 0.2
HOXA3-202ENST00000396352 GRAP2O75791 330 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 MAP3K6O95382 1288 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 APOEP02649 317 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 PFKMP08237 780 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 MAGEA3P43357 314 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 EN1Q05925 392 aaPredicted RBP16.3■□□□□ 0.2
HOXA3-202ENST00000396352 KRT81Q14533 505 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 CCDC14Q49A88 953 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 SLC9A4Q6AI14 798 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 LBX2Q6XYB7 198 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 UNC5AQ6ZN44 842 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 ZNF534Q76KX8 674 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 PCDH19Q8TAB3 1148 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 LRRN4Q8WUT4 740 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 E2F7Q96AV8 911 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 HEXIM2Q96MH2 286 aaKnown RBP16.3■□□□□ 0.2
HOXA3-202ENST00000396352 C20orf27Q9GZN8 174 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 VRTNQ9H8Y1 702 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 HEY1Q9Y5J3 304 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 I3L4J1 428 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 APRTP07741 180 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 TGM2P21980 687 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 PGM1P36871 562 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 TMPRSS15P98073 1019 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 LBRQ14739 615 aaKnown RBP16.3■□□□□ 0.2
HOXA3-202ENST00000396352 TREML2Q5T2D2 321 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 ARID3BQ8IVW6 561 aaPredicted RBP16.3■□□□□ 0.2
HOXA3-202ENST00000396352 UCMAQ8WVF2 138 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 SLC13A1Q9BZW2 595 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 CCDC195A0A1B0GUA6 201 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 NFKBIEO00221 500 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 AMPD1P23109 780 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 PDK2Q15119 407 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 CHI3L2Q15782 390 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 TMEM132AQ24JP5 1023 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 NAIF1Q69YI7 327 aaPredicted RBP16.3■□□□□ 0.2
HOXA3-202ENST00000396352 DPH6Q7L8W6 267 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 APBB2Q92870 758 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 KLC2Q9H0B6 622 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 CYP3A43Q9HB55 503 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 PCDH18Q9HCL0 1135 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 PLA2G4CQ9UP65 541 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 LRCH1Q9Y2L9 728 aa16.3■□□□□ 0.2
HOXA3-202ENST00000396352 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.3■□□□□ 0.2
HOXA3-202ENST00000396352 SPDYE5A6NIY4 337 aa16.29■□□□□ 0.2
HOXA3-202ENST00000396352 A8MXQ7 604 aa16.29■□□□□ 0.2
HOXA3-202ENST00000396352 H3BRJ5 948 aa16.29■□□□□ 0.2
HOXA3-202ENST00000396352 APOL1O14791 398 aa16.29■□□□□ 0.2
HOXA3-202ENST00000396352 MAGEC1O60732 1142 aa16.29■□□□□ 0.2
HOXA3-202ENST00000396352 SNNO75324 88 aaPredicted RBP16.29■□□□□ 0.2
HOXA3-202ENST00000396352 ZBED1O96006 694 aa16.29■□□□□ 0.2
HOXA3-202ENST00000396352 STAG3L1P0CL83 205 aa16.29■□□□□ 0.2
HOXA3-202ENST00000396352 THOC5Q13769 683 aaKnown RBP16.29■□□□□ 0.2
HOXA3-202ENST00000396352 CA9Q16790 459 aa16.29■□□□□ 0.2
HOXA3-202ENST00000396352 ATG16L1Q676U5 607 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms