RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RIOX1Q9H6W3 641 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TRPM5Q9NZQ8 1165 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 POLG2Q9UHN1 485 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ENOPH1Q9UHY7 261 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SYNPO2Q9UMS6 1093 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TRIM49D1C9J1S8 452 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 PSMC3P17980 439 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 C1QBPQ07021 282 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 MPP3Q13368 585 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ITPK1Q13572 414 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 CYP51A1Q16850 503 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 CCDC142Q17RM4 750 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SGO1Q5FBB7 561 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 GLRA4Q5JXX5 417 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ZCCHC8Q6NZY4 707 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 INTS5Q6P9B9 1019 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TMEM154Q6P9G4 183 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 NIPA1Q7RTP0 329 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 FAM111AQ96PZ2 611 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 CGRRF1Q99675 332 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 GANQ9H2C0 597 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 WDR41Q9HAD4 459 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 KLK14Q9P0G3 267 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TMCC3Q9ULS5 477 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 DCCP43146 1447 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 A0A087WZ62 844 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 H3BRB1 525 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 OAZ1P54368 228 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 NUP107P57740 925 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 MMRN1Q13201 1228 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 R3HDM1Q15032 1099 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ANKS6Q68DC2 871 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TTI2Q6NXR4 508 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SAMD7Q7Z3H4 446 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 LZTR1Q8N653 840 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF557Q8N988 423 aaPredicted RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 FAM172AQ8WUF8 416 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ZKSCAN4Q969J2 545 aaPredicted RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TUT1Q9H6E5 874 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 STK39Q9UEW8 545 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 HPSEQ9Y251 543 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 PIK3CDO00329 1044 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 O00370 1275 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 NFIBO00712 420 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 MED24O75448 989 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 RTN3O95197 1032 aaPredicted RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SGPL1O95470 568 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 VTNP04004 478 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 VIL1P09327 827 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 HPGDP15428 266 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 PPP2R1BP30154 601 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SERPINB1P30740 379 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 CYP24A1Q07973 514 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 LAMTOR4Q0VGL1 99 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 FBXO36Q8NEA4 188 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ASB2Q96Q27 587 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 CCT7Q99832 543 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 MMADHCQ9H3L0 296 aaPredicted RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ZSCAN32Q9NX65 697 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 AHSPQ9NZD4 102 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 MROH2AA6NES4 1674 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 VWDEQ8N2E2 1590 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 GPC1P35052 558 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 PLOD1Q02809 727 aaPredicted RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 GRTP1Q5TC63 336 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 NYAP1Q6ZVC0 841 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 JADE3Q92613 823 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 AP4E1Q9UPM8 1137 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 RGL2O15211 777 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 RPN2P04844 631 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TARSP26639 723 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SKP1P63208 163 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ERAP2Q6P179 960 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SLC30A9Q6PML9 568 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF410Q86VK4 478 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SLC26A11Q86WA9 606 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 OR2W6PQ8NHA6 318 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 MAGEC3Q8TD91 643 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SERAC1Q96JX3 654 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TMEM121Q9BTD3 319 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ADAM33Q9BZ11 813 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 RGS18Q9NS28 235 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 THG1LQ9NWX6 298 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 STMN3Q9NZ72 180 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 DEPDC5O75140 1603 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SYNCRIPO60506 623 aaKnown RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 SERPINF2P08697 491 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 FAM117BQ6P1L5 589 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PRMT9Q6P2P2 845 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CCDC60Q8IWA6 550 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 SMARCD1Q96GM5 515 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 CNBD2Q96M20 576 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 C10orf88Q9H8K7 445 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 IL1RL2Q9HB29 575 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 PCDH9Q9HC56 1237 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 STARD7Q9NQZ5 370 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 UXTQ9UBK9 157 aaPredicted RBP5.61□□□□□ -1.51
VPS13C-204ENST00000395898 VTI1BQ9UEU0 232 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 MYH2Q9UKX2 1941 aa5.61□□□□□ -1.51
VPS13C-204ENST00000395898 FKBP6O75344 327 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms