RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ELMOD1Q8N336 334 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 MNS1Q8NEH6 495 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 RNF139Q8WU17 664 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 FAM172AQ8WUF8 416 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 TSC1Q92574 1164 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 FBXO32Q969P5 355 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 PPP2R3CQ969Q6 453 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 CFAP57Q96MR6 1250 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 TBCBQ99426 244 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 PLEKHA4Q9H4M7 779 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 CLIC5Q9NZA1 410 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 LAMA2P24043 3122 aaKnown RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 SLC38A8A6NNN8 435 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 LRCH4O75427 683 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 TADA3O75528 432 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 AIF1P55008 147 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 ZNF252P-AS1Q0IIN9 211 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 SEL1L2Q5TEA6 688 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 TTC9BQ8N6N2 239 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 CEP112Q8N8E3 955 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 HDAC7Q8WUI4 952 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 CENPIQ92674 756 aaPredicted RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 NT5C3BQ969T7 300 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 RPGRIP1Q96KN7 1286 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 TTLL2Q9BWV7 592 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 CRISPLD1Q9H336 500 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 OLA1Q9NTK5 396 aaKnown RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 FBXW11Q9UKB1 542 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 USP18Q9UMW8 372 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 YBX2Q9Y2T7 364 aaKnown RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 YIPF1Q9Y548 306 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 INSL5Q9Y5Q6 135 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 PATJQ8NI35 1801 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 GRM6O15303 877 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 SRGAP2O75044 1071 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 SEC24AO95486 1093 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 LRG1P02750 347 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 ATF6P18850 670 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 RDXP35241 583 aaKnown RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 GPR15P49685 360 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 SULT1E1P49888 294 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 DNA2P51530 1060 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 TUBB4BP68371 445 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 SMAD3P84022 425 aaKnown RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 ATP11AP98196 1134 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 NAA30Q147X3 362 aaPredicted RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 PTPROQ16827 1216 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 CDO1Q16878 200 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 LILRA6Q6PI73 481 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 RSRC2Q7L4I2 434 aaKnown RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 KATNAL2Q8IYT4 538 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 STKLD1Q8NE28 680 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 PGAP3Q96FM1 320 aaPredicted RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 TRMT2BQ96GJ1 504 aaKnown RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 RBM41Q96IZ5 413 aaKnown RBP14.29□□□□□ -0.12
VAPB-202ENST00000395802 MYRFLQ96LU7 910 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 NPY6RQ99463 290 aa14.29□□□□□ -0.12
VAPB-202ENST00000395802 PLXNA4Q9HCM2 1894 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 EFCAB8A8MWE9 144 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 DDX3YO15523 660 aaKnown RBP14.28□□□□□ -0.12
VAPB-202ENST00000395802 ZRANB2O95218 330 aaKnown RBP eCLIP14.28□□□□□ -0.12
VAPB-202ENST00000395802 MIPP30301 263 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 PBX2P40425 430 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 PEX5P50542 639 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 TWF1Q12792 350 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 TAF10Q12962 218 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 MTA1Q13330 715 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 ARL13BQ3SXY8 428 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 PABPC1LQ4VXU2 614 aaKnown RBP14.28□□□□□ -0.12
VAPB-202ENST00000395802 SDHAF4Q5VUM1 108 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 PSTKQ8IV42 348 aaKnown RBP14.28□□□□□ -0.12
VAPB-202ENST00000395802 MAP7D3Q8IWC1 876 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 RCOR2Q8IZ40 523 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 KREMEN2Q8NCW0 462 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 EXD1Q8NHP7 514 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 GIPC2Q8TF65 315 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 NDRG1Q92597 394 aaKnown RBP14.28□□□□□ -0.12
VAPB-202ENST00000395802 PSMB7Q99436 277 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 NKX2-4Q9H2Z4 354 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 NAALADL1Q9UQQ1 740 aa14.28□□□□□ -0.12
VAPB-202ENST00000395802 HIDE1A8MVS5 230 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 M0QYT0 321 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 SOAT2O75908 522 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 ENDOD1O94919 500 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 DNAJB1P25685 340 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 CXCR5P32302 372 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 CLCN4P51793 760 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 COPS2P61201 443 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 DEUP1Q05D60 604 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 C15orf59Q2T9L4 293 aaPredicted RBP14.27□□□□□ -0.12
VAPB-202ENST00000395802 SCYL2Q6P3W7 929 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 BHLHA9Q7RTU4 235 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 ZNF276Q8N554 614 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 SLC7A14Q8TBB6 771 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 ACTRT1Q8TDG2 376 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 TEKT4Q8WW24 435 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 ARNTL2Q8WYA1 636 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 PSMG2Q969U7 264 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 TIFAQ96CG3 184 aa14.27□□□□□ -0.12
VAPB-202ENST00000395802 ZNF512Q96ME7 567 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms