RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 BACE2Q9Y5Z0 518 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 TULP2O00295 520 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 TBC1D4O60343 1298 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 LILRB3O75022 631 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 TJP3O95049 919 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 TCF4P15884 667 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 CCNG2Q16589 344 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 TTC27Q6P3X3 843 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 SPOCD1Q6ZMY3 1216 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 MREGQ8N565 214 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 MRPL43Q8N983 215 aaKnown RBP20.17■□□□□ 0.82
LMNB1-202ENST00000395354 OR10T2Q8NGX3 314 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 GRK7Q8WTQ7 553 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 LPIN3Q9BQK8 851 aa20.17■□□□□ 0.82
LMNB1-202ENST00000395354 OXCT2Q9BYC2 517 aaPredicted RBP20.17■□□□□ 0.82
LMNB1-202ENST00000395354 NGRNQ9NPE2 291 aaKnown RBP20.17■□□□□ 0.82
LMNB1-202ENST00000395354 TSC2P49815 1807 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 TMEM265A0A087WTH1 108 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 OR6C75A6NL08 312 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 PAPSS1O43252 624 aaPredicted RBP20.16■□□□□ 0.82
LMNB1-202ENST00000395354 GABBR2O75899 941 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 PDGFRAP16234 1089 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 RPL17P18621 184 aaKnown RBP20.16■□□□□ 0.82
LMNB1-202ENST00000395354 GJC1P36383 396 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 TFDP3Q5H9I0 405 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 PLPP4Q5VZY2 271 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 RSPO2Q6UXX9 243 aaPredicted RBP20.16■□□□□ 0.82
LMNB1-202ENST00000395354 SLC26A9Q7LBE3 791 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 CCDC105Q8IYK2 499 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 FUKQ8N0W3 1084 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 RXFP2Q8WXD0 754 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 KCTD13Q8WZ19 329 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 RNF25Q96BH1 459 aaPredicted RBP20.16■□□□□ 0.82
LMNB1-202ENST00000395354 LRCH3Q96II8 777 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 SYT15Q9BQS2 421 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 FAM129AQ9BZQ8 928 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 DCLK3Q9C098 648 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 LMAN2LQ9H0V9 348 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 TTYH1Q9H313 450 aaPredicted RBP20.16■□□□□ 0.82
LMNB1-202ENST00000395354 PLEKHA4Q9H4M7 779 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.16■□□□□ 0.82
LMNB1-202ENST00000395354 HPCAL4Q9UM19 191 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 IRAK3Q9Y616 596 aa20.16■□□□□ 0.82
LMNB1-202ENST00000395354 SPDYE4A6NLX3 237 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 ATP2C2O75185 946 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 ECEL1O95672 775 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 ECHS1P30084 290 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 OR1D2P34982 312 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 IRS1P35568 1242 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 TSPY1Q01534 308 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 ATP13A4Q4VNC1 1196 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 ZFYVE27Q5T4F4 411 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 PDE12Q6L8Q7 609 aaKnown RBP20.15■□□□□ 0.82
LMNB1-202ENST00000395354 KHSRPQ92945 711 aaKnown RBP eCLIP20.15■□□□□ 0.82
LMNB1-202ENST00000395354 TMEM209Q96SK2 561 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 CLSTN3Q9BQT9 956 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 HERPUD2Q9BSE4 406 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 RXFP1Q9HBX9 757 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 CDY1Q9Y6F8 540 aa20.15■□□□□ 0.82
LMNB1-202ENST00000395354 CHD7Q9P2D1 2997 aa20.14■□□□□ 0.82
LMNB1-202ENST00000395354 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.14■□□□□ 0.81
LMNB1-202ENST00000395354 C2orf71A6NGG8 1288 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 DAPK3O43293 454 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 LPXNO60711 386 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 TRUB2O95900 331 aaKnown RBP20.14■□□□□ 0.81
LMNB1-202ENST00000395354 NPR3P17342 541 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 MIPP30301 263 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 CDKN2BP42772 138 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 ARPP19P56211 112 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 CREMQ03060 361 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 HLTFQ14527 1009 aaKnown RBP eCLIP20.14■□□□□ 0.81
LMNB1-202ENST00000395354 TAZQ16635 292 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 INTS6LQ5JSJ4 861 aaKnown RBP20.14■□□□□ 0.81
LMNB1-202ENST00000395354 SLC8B1Q6J4K2 584 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 DRICH1Q6PGQ1 229 aaPredicted RBP20.14■□□□□ 0.81
LMNB1-202ENST00000395354 MFSD7Q6UXD7 560 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 LRRTM3Q86VH5 581 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 SCUBE3Q8IX30 993 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 CMASQ8NFW8 434 aaPredicted RBP20.14■□□□□ 0.81
LMNB1-202ENST00000395354 TRIM51Q9BSJ1 452 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 HEMGNQ9BXL5 484 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 ZCWPW1Q9H0M4 648 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 FNIP2Q9P278 1114 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 USP18Q9UMW8 372 aa20.14■□□□□ 0.81
LMNB1-202ENST00000395354 hCG_1818297A0A087WSY0 165 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 MYBPHLA2RUH7 354 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 LRRD1A4D1F6 860 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 C3orf70A6NLC5 250 aaPredicted RBP20.13■□□□□ 0.81
LMNB1-202ENST00000395354 HIDE1A8MVS5 230 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 ADAM12O43184 909 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 CNPP09543 421 aaKnown RBP20.13■□□□□ 0.81
LMNB1-202ENST00000395354 OR4Q2P0C623 313 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 IL1R2P27930 398 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 SDC4P31431 198 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 FLT3P36888 993 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 PTPN9P43378 593 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 LMNB2Q03252 620 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 TRADDQ15628 312 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 CCDC14Q49A88 953 aa20.13■□□□□ 0.81
LMNB1-202ENST00000395354 EFHC1Q5JVL4 640 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms