RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 TNFAIP2Q03169 654 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 GAD2Q05329 585 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 STX3Q13277 289 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 TPSAB1Q15661 275 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 TMEM132AQ24JP5 1023 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 FAM102AQ5T9C2 384 aaPredicted RBP10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 TIFABQ6ZNK6 161 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 TSHZ1Q6ZSZ6 1077 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 CCNJLQ8IV13 435 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 ARFGAP1Q8N6T3 406 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 GSDMBQ8TAX9 411 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 PIP4K2CQ8TBX8 421 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 TEPSINQ96N21 525 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 GBP5Q96PP8 586 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 FERMT1Q9BQL6 677 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 ADAM33Q9BZ11 813 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 PDGFDQ9GZP0 370 aaPredicted RBP10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 NMUR2Q9GZQ4 415 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 SDCBP2Q9H190 292 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 XYLT2Q9H1B5 865 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 RPF1Q9H9Y2 349 aaKnown RBP10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 PCSK1NQ9UHG2 260 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 SSX2IPQ9Y2D8 614 aa10.43□□□□□ -0.74
UBE2D3-208ENST00000394803 KCNN4O15554 427 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 TBX10O75333 385 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 BAG6P46379 1132 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 BCAR1P56945 870 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ACTR3P61158 418 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 BST1Q10588 318 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 DYNC1I2Q13409 638 aaKnown RBP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 CHI3L2Q15782 390 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 TMCO4Q5TGY1 634 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ARID3BQ8IVW6 561 aaPredicted RBP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 GALNT15Q8N3T1 639 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 SEPT1Q8WYJ6 367 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 CDKL2Q92772 493 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 TMEM176AQ96HP8 235 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 RILPQ96NA2 401 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ACAP3Q96P50 834 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 VRTNQ9H8Y1 702 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ALG13Q9NP73 1137 aaKnown RBP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 NXF1Q9UBU9 619 aaKnown RBP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 SOX13Q9UN79 622 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 FAM237BA0A1B0GVD1 139 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 M0QYV0 167 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ACKR2O00590 384 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 DPYSL4O14531 572 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 GLRA3O75311 464 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 MICAL2O94851 1124 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ERBB2P04626 1255 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ENO1P06733 434 aaKnown RBP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 BPGMP07738 259 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 AOC1P19801 751 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 GCLCP48506 637 aaPredicted RBP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 HIC1Q14526 733 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 MAP3K21Q5TCX8 1036 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ATF7IP2Q5U623 682 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 C1orf146Q5VVC0 180 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 PRPF39Q86UA1 669 aaKnown RBP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 SPDYE1Q8NFV5 336 aaPredicted RBP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 PPP4R1Q8TF05 950 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 PPP2R3CQ969Q6 453 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 OLFM3Q96PB7 478 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 CPXM1Q96SM3 734 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ZNF670Q9BS34 389 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 POPDC2Q9HBU9 364 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ZNF277Q9NRM2 450 aaPredicted RBP10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 ETNK2Q9NVF9 386 aa10.42□□□□□ -0.74
UBE2D3-208ENST00000394803 SNNO75324 88 aaPredicted RBP10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 SNUPNO95149 360 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 KRT19P08727 400 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 CD48P09326 243 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 SETSIPP0DME0 302 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 ANPEPP15144 967 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 PROZP22891 400 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 GRK2P25098 689 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 NR2C2P49116 596 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 SLC26A2P50443 739 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 CACNA2D1P54289 1103 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 ZNF280AP59817 542 aaPredicted RBP10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 LAMTOR4Q0VGL1 99 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 TMEM132BQ14DG7 1078 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 SEZ6Q53EL9 994 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 CWF19L1Q69YN2 538 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 MYLK4Q86YV6 388 aaPredicted RBP10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 ZDHHC17Q8IUH5 632 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 IGDCC3Q8IVU1 814 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 ULK2Q8IYT8 1036 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 HACE1Q8IYU2 909 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 EMC1Q8N766 993 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 SREK1Q8WXA9 508 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 FGD4Q96M96 766 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 SYT15Q9BQS2 421 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 CENPKQ9BS16 269 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 DNAI2Q9GZS0 605 aa10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 APOBEC2Q9Y235 224 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 HBS1LQ9Y450 684 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-208ENST00000394803 RLFQ13129 1914 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms