RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 KLHDC10Q6PID8 442 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 RHBDF2Q6PJF5 856 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 MIB1Q86YT6 1006 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 ATRIPQ8WXE1 791 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 NDRG1Q92597 394 aaKnown RBP32.3■■■□□ 2.76
CMTM4-202ENST00000394106 OTUB2Q96DC9 234 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 C2orf42Q9NWW7 574 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 WDR3Q9UNX4 943 aaKnown RBP eCLIP32.3■■■□□ 2.76
CMTM4-202ENST00000394106 PCDHGA2Q9Y5H1 932 aa32.3■■■□□ 2.76
CMTM4-202ENST00000394106 RNF40O75150 1001 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 ADH5P11766 374 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 OPRD1P41143 372 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 YWHAGP61981 247 aaKnown RBP eCLIP32.29■■■□□ 2.76
CMTM4-202ENST00000394106 APBA1Q02410 837 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 CNGA2Q16280 664 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 MAN2A1Q16706 1144 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 EXOC3L4Q17RC7 722 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 GAB4Q2WGN9 574 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 PKDCCQ504Y2 493 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 LY6G5CQ5SRR4 150 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 PKN3Q6P5Z2 889 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 SIX6OS1Q8N1H7 587 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 SECISBP2LQ93073 1101 aaKnown RBP32.29■■■□□ 2.76
CMTM4-202ENST00000394106 CDK5RAP1Q96SZ6 601 aaKnown RBP32.29■■■□□ 2.76
CMTM4-202ENST00000394106 RASAL2Q9UJF2 1139 aa32.29■■■□□ 2.76
CMTM4-202ENST00000394106 LSM7Q9UK45 103 aaKnown RBP32.29■■■□□ 2.76
CMTM4-202ENST00000394106 TDGF1P13385 188 aa32.28■■■□□ 2.76
CMTM4-202ENST00000394106 PRKCSHP14314 528 aaPredicted RBP32.28■■■□□ 2.76
CMTM4-202ENST00000394106 MFAP3P55082 362 aa32.28■■■□□ 2.76
CMTM4-202ENST00000394106 STILQ15468 1287 aa32.28■■■□□ 2.76
CMTM4-202ENST00000394106 RSRC2Q7L4I2 434 aaKnown RBP32.28■■■□□ 2.76
CMTM4-202ENST00000394106 SEMA4AQ9H3S1 761 aa32.28■■■□□ 2.76
CMTM4-202ENST00000394106 MYOFQ9NZM1 2061 aa32.28■■■□□ 2.76
CMTM4-202ENST00000394106 ATG2BQ96BY7 2078 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 LCP1P13796 627 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 RGS7P49802 495 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 EFEMP1Q12805 493 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 FBXO43Q4G163 708 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 PM20D1Q6GTS8 502 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 HTR3DQ70Z44 454 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 ENOSF1Q7L5Y1 443 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 ZNF276Q8N554 614 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 KCTD13Q8WZ19 329 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 EZH1Q92800 747 aaPredicted RBP32.27■■■□□ 2.76
CMTM4-202ENST00000394106 NELL1Q92832 810 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 FAM126AQ9BYI3 521 aaPredicted RBP32.27■■■□□ 2.76
CMTM4-202ENST00000394106 CNTN6Q9UQ52 1028 aa32.27■■■□□ 2.76
CMTM4-202ENST00000394106 GTPBP10A4D1E9 387 aaKnown RBP32.26■■■□□ 2.75
CMTM4-202ENST00000394106 PON1P27169 355 aa32.26■■■□□ 2.75
CMTM4-202ENST00000394106 SLC6A11P48066 632 aa32.26■■■□□ 2.75
CMTM4-202ENST00000394106 NRLP54845 237 aa32.26■■■□□ 2.75
CMTM4-202ENST00000394106 ARHGAP44Q17R89 818 aa32.26■■■□□ 2.75
CMTM4-202ENST00000394106 CT47A1Q5JQC4 288 aaPredicted RBP32.26■■■□□ 2.75
CMTM4-202ENST00000394106 ZBTB44Q8NCP5 570 aa32.26■■■□□ 2.75
CMTM4-202ENST00000394106 TUBGCP2Q9BSJ2 902 aa32.26■■■□□ 2.75
CMTM4-202ENST00000394106 SAMSN1Q9NSI8 373 aaKnown RBP32.26■■■□□ 2.75
CMTM4-202ENST00000394106 APEX2Q9UBZ4 518 aa32.26■■■□□ 2.75
CMTM4-202ENST00000394106 ZFHX2Q9C0A1 2572 aaPredicted RBP32.26■■■□□ 2.75
CMTM4-202ENST00000394106 KCNJ18B7U540 433 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 PIK3R2O00459 728 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 GREM1O60565 184 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 ATG13O75143 517 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 LMNAP02545 664 aaKnown RBP32.25■■■□□ 2.75
CMTM4-202ENST00000394106 USP8P40818 1118 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 GAD2Q05329 585 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 KCNJ12Q14500 433 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 ANO4Q32M45 955 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 VWA3BQ502W6 1294 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 BTBD8Q5XKL5 378 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 PMF1Q6P1K2 205 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 RBM43Q6ZSC3 357 aaKnown RBP32.25■■■□□ 2.75
CMTM4-202ENST00000394106 C12orf40Q86WS4 652 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 SLC35F5Q8WV83 523 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 FAM81BQ96LP2 452 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 NDST4Q9H3R1 872 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 SPHK2Q9NRA0 654 aa32.25■■■□□ 2.75
CMTM4-202ENST00000394106 K7ESF4 209 aa32.24■■■□□ 2.75
CMTM4-202ENST00000394106 PES1O00541 588 aaKnown RBP32.24■■■□□ 2.75
CMTM4-202ENST00000394106 PAPSS2O95340 614 aaPredicted RBP32.24■■■□□ 2.75
CMTM4-202ENST00000394106 HMBSP08397 361 aa32.24■■■□□ 2.75
CMTM4-202ENST00000394106 HEATR6Q6AI08 1181 aaKnown RBP32.24■■■□□ 2.75
CMTM4-202ENST00000394106 BHLHA9Q7RTU4 235 aa32.24■■■□□ 2.75
CMTM4-202ENST00000394106 RPLP0P6Q8NHW5 317 aa32.24■■■□□ 2.75
CMTM4-202ENST00000394106 MARCH2Q9P0N8 246 aa32.24■■■□□ 2.75
CMTM4-202ENST00000394106 STC2O76061 302 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 LETM1O95202 739 aaPredicted RBP32.23■■■□□ 2.75
CMTM4-202ENST00000394106 MBD3O95983 291 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 SEC13P55735 322 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 KDSRQ06136 332 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 DMWDQ09019 674 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 MIIPQ5JXC2 388 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 TMEM25Q86YD3 366 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 NAT16Q8N8M0 369 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 PNKPQ96T60 521 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 CNGB3Q9NQW8 809 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 STRIP2Q9ULQ0 834 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 NFE2L3Q9Y4A8 694 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 VPS13AQ96RL7 3174 aa32.23■■■□□ 2.75
CMTM4-202ENST00000394106 MYO15AQ9UKN7 3530 aa32.22■■■□□ 2.75
CMTM4-202ENST00000394106 YJEFN3A6XGL0 299 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms