RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 WDTC1Q8N5D0 677 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 FLCNQ8NFG4 579 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 OSCP1Q8WVF1 389 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 GOLGA1Q92805 767 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 MIS12Q9H081 205 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 ABCC13Q9NSE7 274 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 CFAP97Q9P2B7 532 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 CYTH4Q9UIA0 394 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 NUDT5Q9UKK9 219 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 HELZP42694 1942 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 YJEFN3A6XGL0 299 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 E7ENQ6 273 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 SLC9A3R1O14745 358 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 SART1O43290 800 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 PDGFBP01127 241 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 KPNA1P52294 538 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 MLLT6P55198 1093 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 STARD6P59095 220 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 GOLGA8FQ08AF8 430 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 GOLGA8DPQ0D2H9 430 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 PDCLQ13371 301 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 TAF3Q5VWG9 929 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 BHLHA9Q7RTU4 235 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 NOP9Q86U38 636 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 ZNF677Q86XU0 584 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 SUGP1Q8IWZ8 645 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 SCUBE3Q8IX30 993 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 TMEM35BQ8NCS4 154 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 RNF139Q8WU17 664 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 ZFRQ96KR1 1074 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 KLF16Q9BXK1 252 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 C8orf33Q9H7E9 229 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 OLA1Q9NTK5 396 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 SH3BP1Q9Y3L3 701 aa19.92■□□□□ 0.78
PDLIM7-204ENST00000393546 E2F8A0AVK6 867 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 MAN2B1O00754 1011 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 TNK2Q07912 1038 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 RUNX3Q13761 415 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 ITPRIPL2Q3MIP1 535 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 TRIM68Q6AZZ1 485 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 ZNF852Q6ZMS4 543 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 TPRG1Q6ZUI0 275 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 FMNL3Q8IVF7 1028 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 TTC8Q8TAM2 541 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 EPS8L1Q8TE68 723 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 DDX1Q92499 740 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 ATP2A3Q93084 1043 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 PPP1R13BQ96KQ4 1090 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 LINC00597Q9H2U6 94 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 EBF3Q9H4W6 596 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 TBC1D17Q9HA65 648 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 GTSE1Q9NYZ3 720 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 STRIP2Q9ULQ0 834 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 WNT6Q9Y6F9 365 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 PIAS3Q9Y6X2 628 aa19.91■□□□□ 0.78
PDLIM7-204ENST00000393546 E5RJQ4 531 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 MDM4O15151 490 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 LTFP02788 710 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 CCDC172P0C7W6 258 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 IRF1P10914 325 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 CLCN5P51795 746 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 COG7P83436 770 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 EFEMP1Q12805 493 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 NR1H3Q13133 447 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 MIB1Q86YT6 1006 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 RNF214Q8ND24 703 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 C1orf131Q8NDD1 294 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 CLEC4CQ8WTT0 213 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 MSANTD3Q96H12 275 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 HPS4Q9NQG7 708 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 IFNKQ9P0W0 207 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 TBC1D14Q9P2M4 693 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 RASAL2Q9UJF2 1139 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 MYO6Q9UM54 1294 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 MRPS17Q9Y2R5 130 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 TICRRQ7Z2Z1 1910 aa19.9■□□□□ 0.78
PDLIM7-204ENST00000393546 KANSL1LA0AUZ9 987 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 NFATC1O95644 943 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 TPM3P06753 285 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 MMEP08473 750 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 ARSAP15289 507 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 CDR2Q01850 454 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 ARID5AQ03989 594 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 EML3Q32P44 896 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 ASTLQ6HA08 431 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 C1orf228Q6PIY5 440 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 CPA6Q8N4T0 437 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 EDEM1Q92611 657 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 CPXM1Q96SM3 734 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 NELL2Q99435 816 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 DDX23Q9BUQ8 820 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 NUP58Q9BVL2 599 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 EDEM3Q9BZQ6 932 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 SYNCQ9H7C4 482 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 MARCH2Q9P0N8 246 aa19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 LSM7Q9UK45 103 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-204ENST00000393546 PAPSS1O43252 624 aaPredicted RBP19.88■□□□□ 0.77
PDLIM7-204ENST00000393546 LSM8O95777 96 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-204ENST00000393546 FERP16591 822 aa19.88■□□□□ 0.77
PDLIM7-204ENST00000393546 CD72P21854 359 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms