RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 RFPL1O75677 317 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 RCN1Q15293 331 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 MECRQ9BV79 373 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 KLC2Q9H0B6 622 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 ETNK2Q9NVF9 386 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 MKS1Q9NXB0 559 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 KCNK4Q9NYG8 393 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 BCLAF3A2AJT9 711 aaKnown RBP19.57■□□□□ 0.72
CBX1-202ENST00000393408 APOL1O14791 398 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 GRAP2O75791 330 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 ZBED1O96006 694 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 P4HA1P13674 534 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 CCDC14Q49A88 953 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 HSF5Q4G112 596 aaPredicted RBP19.57■□□□□ 0.72
CBX1-202ENST00000393408 SLC9A4Q6AI14 798 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 EFCAB12Q6NXP0 572 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 LCLAT1Q6UWP7 414 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 ALYREFQ86V81 257 aaKnown RBP19.57■□□□□ 0.72
CBX1-202ENST00000393408 TRIM42Q8IWZ5 723 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 LMNTD2Q8IXW0 634 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 APBB2Q92870 758 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 ZNF333Q96JL9 665 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 SPATC1LQ9H0A9 340 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 GBA2Q9HCG7 927 aaPredicted RBP19.57■□□□□ 0.72
CBX1-202ENST00000393408 PCDH18Q9HCL0 1135 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 GPATCH2LQ9NWQ4 482 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 NMRK1Q9NWW6 199 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 HEY1Q9Y5J3 304 aa19.57■□□□□ 0.72
CBX1-202ENST00000393408 I3L4J1 428 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 SOCS7O14512 581 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 KRT36O76013 467 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 PFKMP08237 780 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 VHLP40337 213 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 BCAR1P56945 870 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 INCA1Q0VD86 236 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 BST1Q10588 318 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 BOLA3Q53S33 107 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 LGSNQ5TDP6 509 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 CES4AQ5XG92 561 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 PCDH19Q8TAB3 1148 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 HPDLQ96IR7 371 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 ARMCX1Q9P291 453 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 BARX2Q9UMQ3 279 aaPredicted RBP19.56■□□□□ 0.72
CBX1-202ENST00000393408 SLC15A5A6NIM6 579 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 EIF4E1BA6NMX2 242 aaKnown RBP19.56■□□□□ 0.72
CBX1-202ENST00000393408 DPYSL4O14531 572 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 NVLO15381 856 aaKnown RBP19.56■□□□□ 0.72
CBX1-202ENST00000393408 UGT1A9O60656 530 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 APOEP02649 317 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 APRTP07741 180 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 NDST1P52848 882 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 ARMC2Q8NEN0 867 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.56■□□□□ 0.722e-8■■□□□ 12.6
CBX1-202ENST00000393408 USP6NLQ92738 828 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 MIS12Q9H081 205 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 UGT1A7Q9HAW7 530 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 UGT1A10Q9HAW8 530 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 UGT1A8Q9HAW9 530 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 PRMT7Q9NVM4 692 aaPredicted RBP19.56■□□□□ 0.72
CBX1-202ENST00000393408 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.56■□□□□ 0.72
CBX1-202ENST00000393408 SIRPGQ9P1W8 387 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 TSPAN16Q9UKR8 245 aa19.56■□□□□ 0.72
CBX1-202ENST00000393408 BRCA1P38398 1863 aaKnown RBP19.56■□□□□ 0.72
CBX1-202ENST00000393408 PSMG1O95456 288 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 GSTA2P09210 222 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 MCF2P10911 925 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 SESN3P58005 492 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 PRKG1Q13976 671 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 CCDC6Q16204 474 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 MUM1Q2TAK8 710 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 MCUQ8NE86 351 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 WDR60Q8WVS4 1066 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 TEKT4Q8WW24 435 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 E2F7Q96AV8 911 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 LRRC39Q96DD0 335 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 R3HDMLQ9H3Y0 253 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 CAPN14A8MX76 684 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 MAP3K6O95382 1288 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 CSH1P0DML2 217 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 CSH2P0DML3 217 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 OCRLQ01968 901 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 BMPR2Q13873 1038 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 TEX44Q53QW1 395 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 ATG16L1Q676U5 607 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 SCYL2Q6P3W7 929 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 UNC5AQ6ZN44 842 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 CCDC110Q8TBZ0 833 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 NRG4Q8WWG1 115 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 SPATA33Q96N06 139 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 NFKBIZQ9BYH8 718 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 ASB7Q9H672 318 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 IFT122Q9HBG6 1241 aa19.55■□□□□ 0.72
CBX1-202ENST00000393408 FZD9O00144 591 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 LINGO3P0C6S8 592 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 MAGEA3P43357 314 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 TMPRSS15P98073 1019 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 TNFAIP2Q03169 654 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 CA9Q16790 459 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 SLC10A6Q3KNW5 377 aa19.54■□□□□ 0.72
CBX1-202ENST00000393408 SNX30Q5VWJ9 437 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms