RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CT47A1Q5JQC4 288 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 TSSK4Q6SA08 328 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 CCDC186Q7Z3E2 898 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 SLC47A2Q86VL8 602 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 SFTPA1Q8IWL2 248 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 BBS7Q8IWZ6 715 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 SIX6OS1Q8N1H7 587 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 CPA6Q8N4T0 437 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 SLC35F5Q8WV83 523 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 SHC3Q92529 594 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 EDEM1Q92611 657 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 ATOH1Q92858 354 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 MIS12Q9H081 205 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 C8orf33Q9H7E9 229 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 LMAN1LQ9HAT1 526 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 LRRC4Q9HBW1 653 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 PLCB1Q9NQ66 1216 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 CYLDQ9NQC7 956 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 POLR3BQ9NW08 1133 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 SPATA6Q9NWH7 488 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 C2orf42Q9NWW7 574 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 TJP2Q9UDY2 1190 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 CYTH4Q9UIA0 394 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 KIAA1257Q9ULG3 409 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 CNTN6Q9UQ52 1028 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 SH3BP1Q9Y3L3 701 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 KIF26AQ9ULI4 1882 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 MYO16Q9Y6X6 1858 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 FOXN3O00409 490 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 EPHB6O15197 1021 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 GREM1O60565 184 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 NFATC1O95644 943 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 EGFP01133 1207 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 TCF3P15923 654 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZNF18P17022 549 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 PFKLP17858 780 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 ATP5C1P36542 298 aaKnown RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 GALK1P51570 392 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 PTPN5P54829 565 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 DAOAP59103 153 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 NHLH1Q02575 133 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 MESP2Q0VG99 397 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 MTAPQ13126 283 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 DRAP1Q14919 205 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 CNGA2Q16280 664 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 KLHL40Q2TBA0 621 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 KLHDC7AQ5VTJ3 777 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 TAF3Q5VWG9 929 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 FSTL4Q6MZW2 842 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 PKN3Q6P5Z2 889 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 ENOSF1Q7L5Y1 443 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 APTXQ7Z2E3 356 aaKnown RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 C12orf40Q86WS4 652 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 RALGPS2Q86X27 583 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 DHX40Q8IX18 779 aaKnown RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 MAML2Q8IZL2 1156 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZNF606Q8WXB4 792 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 EZH1Q92800 747 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 ATP2A3Q93084 1043 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 CLDN23Q96B33 292 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 P2RY11Q96G91 374 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 FUCA2Q9BTY2 467 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 KLF16Q9BXK1 252 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 UBXN6Q9BZV1 441 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 ST7Q9NRC1 585 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 FAM207AQ9NSI2 230 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 DNMT3LQ9UJW3 386 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 MRPS17Q9Y2R5 130 aaKnown RBP8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZNF318Q5VUA4 2279 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 DENND4CQ5VZ89 1909 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 ANAPC1Q9H1A4 1944 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZDBF2Q9HCK1 2354 aa8.05□□□□□ -1.12
HMGB3P1-201ENST00000393368 VPS13AQ96RL7 3174 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 SLC12A8A0AV02 714 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 E2F8A0AVK6 867 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 E5RJQ4 531 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 MSI1O43347 362 aaKnown RBP8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 RALAP11233 206 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 UCHL3P15374 230 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 CDK11BP21127 795 aaKnown RBP8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 CLCN1P35523 988 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 PLA2G5P39877 138 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 OPRD1P41143 372 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 GPD2P43304 727 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 SLC6A11P48066 632 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 PSEN1P49768 467 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 SATB1Q01826 763 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 KDSRQ06136 332 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 PDCLQ13371 301 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 CCINQ13939 588 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 DHCR24Q15392 516 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 SYCP1Q15431 976 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 STILQ15468 1287 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 LY6G5CQ5SRR4 150 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 BSPRYQ5W0U4 402 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 BTBD8Q5XKL5 378 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 PM20D1Q6GTS8 502 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 RHBDF2Q6PJF5 856 aa8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 RSRC2Q7L4I2 434 aaKnown RBP8.04□□□□□ -1.12
HMGB3P1-201ENST00000393368 DDX42Q86XP3 938 aaKnown RBP eCLIP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms