RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PRAMEP78395 509 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 CCNIQ14094 377 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 TKFCQ3LXA3 575 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 PPM1LQ5SGD2 360 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 FRMD7Q6ZUT3 714 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 MZB1Q8WU39 189 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 MSTO1Q9BUK6 570 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 C17orf75Q9HAS0 396 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.97■□□□□ 0.31
PHTF1-205ENST00000393357 HBS1LQ9Y450 684 aaKnown RBP16.97■□□□□ 0.31
PHTF1-205ENST00000393357 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
PHTF1-205ENST00000393357 BUD23O43709 281 aaKnown RBP16.97■□□□□ 0.31
PHTF1-205ENST00000393357 SNRPAP09012 282 aaKnown RBP16.97■□□□□ 0.31
PHTF1-205ENST00000393357 SRGAP2CP0DJJ0 459 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 SRGAP2BP0DMP2 458 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 ADARP55265 1226 aaKnown RBP16.97■□□□□ 0.31
PHTF1-205ENST00000393357 MYL6P60660 151 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 FSTL1Q12841 308 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 NFIL3Q16649 462 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 GSTA3Q16772 222 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 AOC3Q16853 763 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 C15orf59Q2T9L4 293 aaPredicted RBP16.97■□□□□ 0.31
PHTF1-205ENST00000393357 DNAL1Q4LDG9 190 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 LRRC8BQ6P9F7 803 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 UBA3Q8TBC4 463 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 TFAP2BQ92481 460 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 NGLY1Q96IV0 654 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 NGRNQ9NPE2 291 aaKnown RBP16.97■□□□□ 0.31
PHTF1-205ENST00000393357 FBXO40Q9UH90 709 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 POMPQ9Y244 141 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 UBE4BO95155 1302 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 CRABP2P29373 138 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 NT5C2P49902 561 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 POLR3FQ9H1D9 316 aaPredicted RBP16.96■□□□□ 0.31
PHTF1-205ENST00000393357 EHMT1Q9H9B1 1298 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 UBAP1Q9NZ09 502 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 VIL1P09327 827 aaKnown RBP16.96■□□□□ 0.31
PHTF1-205ENST00000393357 MRPS9P82933 396 aaKnown RBP16.96■□□□□ 0.31
PHTF1-205ENST00000393357 ITGA9Q13797 1035 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 PLEKHA7Q6IQ23 1121 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 ACAD11Q709F0 780 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 THNSL1Q8IYQ7 743 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 ZFP28Q8NHY6 868 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 TMIGD2Q96BF3 282 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 LRGUKQ96M69 825 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 MIS12Q9H081 205 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 WDR55Q9H6Y2 383 aaPredicted RBP16.96■□□□□ 0.31
PHTF1-205ENST00000393357 CAAP1Q9H8G2 361 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 PLLPQ9Y342 182 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 MYH9P35579 1960 aaKnown RBP16.96■□□□□ 0.31
PHTF1-205ENST00000393357 MAST2Q6P0Q8 1798 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 DESP17661 470 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 ADORA2AP29274 412 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 KRT72Q14CN4 511 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 SPDYAQ5MJ70 313 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 SLC26A11Q86WA9 606 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 CPNE9Q8IYJ1 553 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 ZNF398Q8TD17 642 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 SLC44A1Q8WWI5 657 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 ALKBH8Q96BT7 664 aaKnown RBP16.96■□□□□ 0.31
PHTF1-205ENST00000393357 KCNK4Q9NYG8 393 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 CDH22Q9UJ99 828 aa16.96■□□□□ 0.31
PHTF1-205ENST00000393357 SYNJ2BP-COX16A0A087WUM0 186 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 CAPN14A8MX76 684 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 MAGEC1O60732 1142 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 RBL1P28749 1068 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 CCR10P46092 362 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 ALDH1A3P47895 512 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 RAP1GDS1P52306 607 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 IGBP1P78318 339 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 ROR1Q01973 937 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 GCNT1Q02742 428 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 N4BP2L1Q5TBK1 243 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-205ENST00000393357 TTC39BQ5VTQ0 682 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-205ENST00000393357 FAM219BQ5XKK7 198 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 DENND1BQ6P3S1 775 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 VTI1AQ96AJ9 217 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 TMA16Q96EY4 203 aaKnown RBP16.95■□□□□ 0.3
PHTF1-205ENST00000393357 COX16Q9P0S2 106 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 PHF24Q9UPV7 400 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 MRPL42Q9Y6G3 142 aaKnown RBP16.95■□□□□ 0.3
PHTF1-205ENST00000393357 RREB1Q92766 1687 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 PLSCR1O15162 318 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 SIN3BO75182 1162 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 LRCH4O75427 683 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 STIP1P31948 543 aaKnown RBP16.95■□□□□ 0.3
PHTF1-205ENST00000393357 STT3AP46977 705 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 RGS7P49802 495 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 TSHZ1Q6ZSZ6 1077 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 TMC7Q7Z402 723 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 METTL25Q8N6Q8 603 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 TRIML2Q8N7C3 387 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 PPP4R1Q8TF05 950 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 TBC1D22BQ9NU19 505 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 SEPT10Q9P0V9 454 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 HSFX1Q9UBD0 423 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 FARP1Q9Y4F1 1045 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-205ENST00000393357 PLIN4Q96Q06 1357 aa16.95■□□□□ 0.3
PHTF1-205ENST00000393357 CDH15P55291 814 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms