RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MAP1SQ66K74 1059 aaPredicted RBP20.3■□□□□ 0.84
SHANK1-203ENST00000391813 NCKIPSDQ9NZQ3 722 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 ARMCX1Q9P291 453 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 MED24O75448 989 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 PRKAA2P54646 552 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 DUPD1Q68J44 220 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 LINC00523Q86TU6 105 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 ACTL9Q8TC94 416 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 SLC20A1Q8WUM9 679 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 LENG1Q96BZ8 264 aaPredicted RBP20.3■□□□□ 0.84
SHANK1-203ENST00000391813 CLOCKO15516 846 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 ZSCAN9O15535 394 aaPredicted RBP20.3■□□□□ 0.84
SHANK1-203ENST00000391813 PRKCBP05771 671 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 RFWD2Q8NHY2 731 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 PI4K2AQ9BTU6 479 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 GRIP2Q9C0E4 1043 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 CASS4Q9NQ75 786 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 RCCD1A6NED2 376 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 SHBGP04278 402 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 RPLP2P05387 115 aaKnown RBP20.3■□□□□ 0.84
SHANK1-203ENST00000391813 CLEC16AQ2KHT3 1053 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 AAGABQ6PD74 315 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 DNAJC18Q9H819 358 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 TRIM45Q9H8W5 580 aaPredicted RBP20.3■□□□□ 0.84
SHANK1-203ENST00000391813 ERAP1Q9NZ08 941 aa20.3■□□□□ 0.84
SHANK1-203ENST00000391813 CFAP99D6REC4 459 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 HBP1O60381 514 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 FKBP9O95302 570 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 RPL10AP62906 217 aaKnown RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 DGKDQ16760 1214 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 ANO4Q32M45 955 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 FKBP9P1Q75LS8 142 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 ETNPPLQ8TBG4 499 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 SLC35C1Q96A29 364 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 C1orf50Q9BV19 199 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 LRRC40Q9H9A6 602 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 TUBA8Q9NY65 449 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 RRN3Q9NYV6 651 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 C2CD2LO14523 706 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 VIL1P09327 827 aaKnown RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 TGM2P21980 687 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 PRKAA1Q13131 559 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 KCTD21Q4G0X4 260 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 GJC2Q5T442 439 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 LUZP2Q86TE4 346 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 ACER1Q8TDN7 264 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 TFB1MQ8WVM0 346 aaKnown RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 LZTS3O60299 673 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 KRT36O76013 467 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 DGCR14Q96DF8 476 aaKnown RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 VCPIP1Q96JH7 1222 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 AVENQ9NQS1 362 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 VTI1BQ9UEU0 232 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 SCAF8Q9UPN6 1271 aaKnown RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 ACADSBP45954 432 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 SULT1E1P49888 294 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 INHBEP58166 350 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 PDK3Q15120 406 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 TCHHL1Q5QJ38 904 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 TBCELQ5QJ74 424 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 RRM2BQ7LG56 351 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 DHDDSQ86SQ9 333 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 HOMEZQ8IX15 550 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 RMDN1Q96DB5 314 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 OTUB1Q96FW1 271 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-203ENST00000391813 CLIC5Q9NZA1 410 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 TBX20Q9UMR3 447 aa20.29■□□□□ 0.84
SHANK1-203ENST00000391813 PHGDHO43175 533 aaKnown RBP20.28■□□□□ 0.84
SHANK1-203ENST00000391813 CLASP2O75122 1294 aaKnown RBP20.28■□□□□ 0.84
SHANK1-203ENST00000391813 LSM8O95777 96 aaKnown RBP20.28■□□□□ 0.84
SHANK1-203ENST00000391813 SLC1A6P48664 564 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 C1QBPQ07021 282 aaKnown RBP20.28■□□□□ 0.84
SHANK1-203ENST00000391813 MMRN1Q13201 1228 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 ARMCX4Q5H9R4 360 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 AGBL1Q96MI9 1066 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 E2F8A0AVK6 867 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 EVPLLA8MZ36 301 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 ZNF197O14709 1029 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 DDX5P17844 614 aaKnown RBP20.28■□□□□ 0.84
SHANK1-203ENST00000391813 ACCSLQ4AC99 568 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 GNASQ5JWF2 1037 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 ZNF513Q8N8E2 541 aaPredicted RBP20.28■□□□□ 0.84
SHANK1-203ENST00000391813 OSCP1Q8WVF1 389 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 MRPS26Q9BYN8 205 aaKnown RBP20.28■□□□□ 0.84
SHANK1-203ENST00000391813 MGRN1O60291 552 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 CYP2C8P10632 490 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 EXOC3L1Q86VI1 746 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 ELMOD1Q8N336 334 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 TDRD5Q8NAT2 981 aaKnown RBP20.28■□□□□ 0.84
SHANK1-203ENST00000391813 ZFYVE19Q96K21 471 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 C17orf80Q9BSJ5 609 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 NT5C1AQ9BXI3 368 aa20.28■□□□□ 0.84
SHANK1-203ENST00000391813 LCP1P13796 627 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 ANPEPP15144 967 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 CCDC153Q494R4 210 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 FAXCQ5TGI0 409 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 KYAT3Q6YP21 454 aaKnown RBP20.27■□□□□ 0.84
SHANK1-203ENST00000391813 ZNF720Q7Z2F6 126 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 KIF12Q96FN5 646 aa20.27■□□□□ 0.84
SHANK1-203ENST00000391813 AGAP1Q9UPQ3 857 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms