RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 TLX1P31314 330 aaPredicted RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 HK3P52790 923 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 MRPS5P82675 430 aaKnown RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 FMO1Q01740 532 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 TCF15Q12870 199 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 TBX2Q13207 712 aaPredicted RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 HDAC1Q13547 482 aaPredicted RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 ATP2B3Q16720 1220 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 PIK3CD-AS1Q5SR53 167 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 ARHGAP17Q68EM7 881 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 FAM180AQ6UWF9 173 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 Q6ZR54 194 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 DDX53Q86TM3 631 aaKnown RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 ZGPATQ8N5A5 531 aaKnown RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 LILRB1Q8NHL6 650 aaPredicted RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 FGFBP3Q8TAT2 258 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 TMEM174Q8WUU8 243 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 ATG4AQ8WYN0 398 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 KLHL29Q96CT2 875 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 IPO9Q96P70 1041 aaKnown RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 FIZ1Q96SL8 496 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 CTRCQ99895 268 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 RBM4BQ9BQ04 359 aaKnown RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 ORAI3Q9BRQ5 295 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 DHRS4Q9BTZ2 278 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 TM2D2Q9BX73 214 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 KCTD10Q9H3F6 313 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 TXNRD2Q9NNW7 524 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 AMFRQ9UKV5 643 aa0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 SIRT4Q9Y6E7 314 aaPredicted RBP0.03□□□□□ -2.4
TRAJ53-201ENST00000390485 KIR2DS5A0A0G2JLQ3 304 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 A6NNC1 897 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 KIR2DS3K7RE56 304 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 AP4M1O00189 453 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 GRM6O15303 877 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 ENDOD1O94919 500 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 CD48P09326 243 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 NR1D1P20393 614 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 DGKAP23743 735 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 RANGAP1P46060 587 aaPredicted RBP0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 COPB1P53618 953 aaKnown RBP0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 CTXN1P60606 82 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 SEPT2Q15019 361 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 SMTNL2Q2TAL5 461 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 TDRD12Q587J7 1177 aaKnown RBP0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 FAAP20Q6NZ36 180 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 FGD2Q7Z6J4 655 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 LRRTM1Q86UE6 522 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 C16orf71Q8IYS4 520 aaPredicted RBP0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 TCP11L2Q8N4U5 519 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 SRBD1Q8N5C6 995 aaKnown RBP0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 CELF2-AS1Q8N7Q2 184 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 ZNF248Q8NDW4 579 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 GRAPLQ8TC17 118 aaPredicted RBP0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 RFT1Q96AA3 541 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 F2RL3Q96RI0 385 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 TUBA1CQ9BQE3 449 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 ELOVL1Q9BW60 279 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 ISCUQ9H1K1 167 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 PDZD7Q9H5P4 517 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 PIF1Q9H611 641 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 GAREM1Q9H706 876 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 CABP5Q9NP86 173 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 SAMD15Q9P1V8 674 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 FZD10Q9ULW2 581 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 DLGAP4Q9Y2H0 992 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 MRPS23Q9Y3D9 190 aaKnown RBP0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 MRVI1Q9Y6F6 885 aa0.02□□□□□ -2.41
TRAJ53-201ENST00000390485 GREB1LQ9C091 1923 aaPredicted RBP0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 LCHNA4D1U4 455 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 CBX4O00257 560 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 MDM4O15151 490 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 FOXH1O75593 365 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 DNAJC8O75937 253 aaPredicted RBP0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 SORBS2O94875 1100 aaKnown RBP0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 CRYAAP02489 173 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 CHRNB1P11230 501 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 HOXA7P31268 230 aaPredicted RBP0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 RFX5P48382 616 aaPredicted RBP0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 GCLCP48506 637 aaPredicted RBP0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 CLK1P49759 484 aaKnown RBP0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 RASSF2P50749 326 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 SLC12A2P55011 1212 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 TRAF3Q13114 568 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 SLC14A1Q13336 389 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 KCNB1Q14721 858 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 DLGAP5Q15398 846 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 DDR2Q16832 855 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 DCAF12L1Q5VU92 463 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 PARM1Q6UWI2 310 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 METTL7BQ6UX53 244 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 KRT26Q7Z3Y9 468 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 CTU1Q7Z7A3 348 aaKnown RBP0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 EFHBQ8N7U6 833 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 ZNF610Q8N9Z0 462 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 FAM216AQ8WUB2 273 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 TMED6Q8WW62 240 aa0.01□□□□□ -2.41
TRAJ53-201ENST00000390485 CD101Q93033 1021 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms