RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CFHR1Q03591 330 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 LAMB3Q13751 1172 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 MFSD13AQ14CX5 517 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 RBMS2Q15434 407 aaKnown RBP4.05□□□□□ -1.76
TRAV40-201ENST00000390467 KIAA0753Q2KHM9 967 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 C10orf25Q5T742 122 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 PLAG1Q6DJT9 500 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 CYB5RLQ6IPT4 315 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 CHST15Q7LFX5 561 aaPredicted RBP4.05□□□□□ -1.76
TRAV40-201ENST00000390467 IRF2BP2Q7Z5L9 587 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 PIP4P1Q86T03 277 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 LIX1LQ8IVB5 337 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 YAF2Q8IY57 180 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 HMCESQ96FZ2 354 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 SIGLEC11Q96RL6 698 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 TMEM79Q9BSE2 394 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 SELENOOQ9BVL4 669 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 ZNF287Q9HBT7 754 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 TMEM184CQ9NVA4 438 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 GAR1Q9NY12 217 aaKnown RBP4.05□□□□□ -1.76
TRAV40-201ENST00000390467 RGS17Q9UGC6 210 aaPredicted RBP4.05□□□□□ -1.76
TRAV40-201ENST00000390467 ITGB1BP2Q9UKP3 347 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 SLC27A6Q9Y2P4 619 aa4.05□□□□□ -1.76
TRAV40-201ENST00000390467 LOC105371045A0A1W2PR82 267 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 AQP7P3A6NL99 342 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 A8MVJ9 347 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 GOLIM4O00461 696 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 CA12O43570 354 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 PRAMEF2O60811 474 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 RNF8O76064 485 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 HRGP04196 525 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 BTF3P20290 206 aaKnown RBP4.04□□□□□ -1.76
TRAV40-201ENST00000390467 RBL1P28749 1068 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 COPAP53621 1224 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 FOXG1P55316 489 aaPredicted RBP4.04□□□□□ -1.76
TRAV40-201ENST00000390467 GPC5P78333 572 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 HTRA4P83105 476 aaPredicted RBP4.04□□□□□ -1.76
TRAV40-201ENST00000390467 CFHR3Q02985 330 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 ZNF91Q05481 1191 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 FHL1Q13642 323 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 FHL3Q13643 280 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 GBX1Q14549 363 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 MANEALQ5VSG8 457 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 DENND2CQ68D51 928 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 CLEC9AQ6UXN8 241 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 RANBP10Q6VN20 620 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 SRGAP1Q7Z6B7 1085 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 TSR2Q969E8 191 aaKnown RBP4.04□□□□□ -1.76
TRAV40-201ENST00000390467 MSLNLQ96KJ4 702 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 HS6ST2Q96MM7 605 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 HIST1H2AAQ96QV6 131 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 DNAJB11Q9UBS4 358 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 G3BP2Q9UN86 482 aaKnown RBP4.04□□□□□ -1.76
TRAV40-201ENST00000390467 PCDHGB6Q9Y5F9 930 aa4.04□□□□□ -1.76
TRAV40-201ENST00000390467 FRMPD2Q68DX3 1309 aaPredicted RBP4.03□□□□□ -1.76
TRAV40-201ENST00000390467 CLIC1O00299 241 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 FYB1O15117 783 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 MT-ND5P03915 603 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 ADRA1DP25100 572 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 FAM193AP78312 1265 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 C4orf46Q504U0 113 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 CC2D1BQ5T0F9 858 aaKnown RBP4.03□□□□□ -1.76
TRAV40-201ENST00000390467 GRHL2Q6ISB3 625 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 DARS2Q6PI48 645 aaKnown RBP4.03□□□□□ -1.76
TRAV40-201ENST00000390467 C12orf76Q8N812 135 aaPredicted RBP4.03□□□□□ -1.76
TRAV40-201ENST00000390467 PNPLA1Q8N8W4 532 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 CUL5Q93034 780 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 PRR11Q96HE9 360 aaPredicted RBP4.03□□□□□ -1.76
TRAV40-201ENST00000390467 ZNF668Q96K58 619 aaPredicted RBP4.03□□□□□ -1.76
TRAV40-201ENST00000390467 SNX22Q96L94 193 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 APOL5Q9BWW9 433 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 FAM83DQ9H4H8 585 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 CAPN11Q9UMQ6 739 aa4.03□□□□□ -1.76
TRAV40-201ENST00000390467 A0A087WZ62 844 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.02□□□□□ -1.77
TRAV40-201ENST00000390467 MGEA5O60502 916 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 MBPP02686 304 aaPredicted RBP4.02□□□□□ -1.77
TRAV40-201ENST00000390467 RHCEP18577 417 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 YY1P25490 414 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 PLCD1P51178 756 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 EIF4A1P60842 406 aaKnown RBP4.02□□□□□ -1.77
TRAV40-201ENST00000390467 RHDQ02161 417 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 SRSF1Q07955 248 aaKnown RBP eCLIP4.02□□□□□ -1.77
TRAV40-201ENST00000390467 SEMA5AQ13591 1074 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 ST3GAL2Q16842 350 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 VSTM1Q6UX27 236 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 MRPL10Q7Z7H8 261 aaKnown RBP4.02□□□□□ -1.77
TRAV40-201ENST00000390467 MYO1HQ8N1T3 1032 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 WIPF2Q8TF74 440 aaPredicted RBP4.02□□□□□ -1.77
TRAV40-201ENST00000390467 HIC2Q96JB3 615 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 VCPIP1Q96JH7 1222 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 KRTAP1-5Q9BYS1 174 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 USP29Q9HBJ7 922 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 MLXIPLQ9NP71 852 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 VPS45Q9NRW7 570 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 NKX1-2Q9UD57 310 aaPredicted RBP4.02□□□□□ -1.77
TRAV40-201ENST00000390467 ZNF212Q9UDV6 495 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 STEAP1Q9UHE8 339 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 FZD4Q9ULV1 537 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 HPSEQ9Y251 543 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms