RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 PDK4Q16654 411 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 SNX30Q5VWJ9 437 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 TAS2R42Q7RTR8 314 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 PALB2Q86YC2 1186 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 AGAP11Q8TF27 550 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 EGFL8Q99944 293 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 LACTBL1A8MY62 500 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 AP1G2O75843 785 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 CPB1P15086 417 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 TAS2R40P59535 323 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 RPL7AP62424 266 aaKnown RBP16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 SLC34A1Q06495 639 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 DENND1BQ6P3S1 775 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 LRRC39Q96DD0 335 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 KCNA2P16389 499 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 KBTBD12Q3ZCT8 623 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 N4BP2L1Q5TBK1 243 aaPredicted RBP16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 MFSD5Q6N075 450 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 REPS2Q8NFH8 660 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 EFCAB1Q9HAE3 211 aa16.65■□□□□ 0.26
PTPRN2-201ENST00000389413 NFASCO94856 1347 aa16.64■□□□□ 0.26
PTPRN2-201ENST00000389413 PMPCBO75439 489 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 SERPINB5P36952 375 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 NR2C2P49116 596 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 AAR2Q9Y312 384 aaKnown RBP16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 RPL22P35268 128 aaKnown RBP16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 PDCD2Q16342 344 aaPredicted RBP16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 SEL1L3Q68CR1 1132 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 ADGRF2Q8IZF7 708 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 HACD3Q9P035 362 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 IGLV3-22A0A075B6J6 115 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 SERPINE1P05121 402 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 TGFB2P61812 414 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 MPP3Q13368 585 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 HTR3CQ8WXA8 447 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 JADE3Q92613 823 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 CYP39A1Q9NYL5 469 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 RBL1P28749 1068 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 GEMP55040 296 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 FBXO47Q5MNV8 452 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 OR5B17Q8NGF7 314 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 TRAPPC12Q8WVT3 735 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 FHDC1Q9C0D6 1143 aaPredicted RBP16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 RNPEPL1Q9HAU8 725 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 IARS2Q9NSE4 1012 aaKnown RBP16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 PPP2R3BQ9Y5P8 575 aa16.64■□□□□ 0.25
PTPRN2-201ENST00000389413 hCG_1818297A0A087WSY0 165 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 C6orf222P0C671 652 aaPredicted RBP16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 OCA2Q04671 838 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 BBS12Q6ZW61 710 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 POLNQ7Z5Q5 900 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 SCUBE3Q8IX30 993 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 RUVBL2Q9Y230 463 aaKnown RBP16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 E5RJQ4 531 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 ZCCHC18P0CG32 403 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 UBA1P22314 1058 aaKnown RBP16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 GP5P40197 560 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 SLC35G1Q2M3R5 365 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 SWT1Q5T5J6 900 aaKnown RBP16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 PDPK2PQ6A1A2 396 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 IZUMO2Q6UXV1 221 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 ZSWIM2Q8NEG5 633 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 PARK7Q99497 189 aaKnown RBP16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 SIX2Q9NPC8 291 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 ARMCX1Q9P291 453 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 SOX13Q9UN79 622 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 ZBBXA8MT70 800 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 DCDC2CA8MYV0 355 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 HADHAP40939 763 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 SLC1A6P48664 564 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 SLC6A3Q01959 620 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 MBOAT7Q96N66 472 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 LRCH1Q9Y2L9 728 aa16.63■□□□□ 0.25
PTPRN2-201ENST00000389413 SYCE1LA8MT33 242 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 E9PBE3 544 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 SLCO1B7G3V0H7 640 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 CYB561D2O14569 222 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 ALOX15BO15296 676 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 CHADO15335 359 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 NCAM2O15394 837 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 KLHL41O60662 606 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 NDUFS3O75489 264 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 SEC24DO94855 1032 aaPredicted RBP16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 FBXO21O94952 628 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 TSHRP16473 764 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 HSPA13P48723 471 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 AGAP9Q5VTM2 703 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 MFSD14CQ5VZR4 134 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 IFNEQ86WN2 208 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 ZNF398Q8TD17 642 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 APOL2Q9BQE5 337 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 DMAC2Q9NW81 257 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 H3BRB1 525 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 STMN1P16949 149 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 KCNT2Q6UVM3 1135 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 LAYNQ6UX15 382 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 TRABD2AQ86V40 505 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 UNC45BQ8IWX7 931 aa16.62■□□□□ 0.25
PTPRN2-201ENST00000389413 HELQQ8TDG4 1101 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 363 ms