RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 PRRT3Q5FWE3 981 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 MPP7Q5T2T1 576 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 STXBP5Q5T5C0 1151 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 ATPAF1Q5TC12 328 aaPredicted RBP6.06□□□□□ -1.44
ERCC4-202ENST00000389138 CST9Q5W186 159 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 ZNF530Q6P9A1 599 aaPredicted RBP6.06□□□□□ -1.44
ERCC4-202ENST00000389138 SUSD1Q6UWL2 747 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 GBP6Q6ZN66 633 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 FRMD7Q6ZUT3 714 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 CPLX4Q7Z7G2 160 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 ARMC8Q8IUR7 673 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 ADSSL1Q8N142 457 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 NCSTNQ92542 709 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 CCDC140Q96MF4 163 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 PTPN18Q99952 460 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 MID1IP1Q9NPA3 183 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 CACNG4Q9UBN1 327 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 EXTL2Q9UBQ6 330 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 CLIP2Q9UDT6 1046 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 SMG5Q9UPR3 1016 aaKnown RBP6.06□□□□□ -1.44
ERCC4-202ENST00000389138 EXOC6BQ9Y2D4 811 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 TMED5Q9Y3A6 229 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 PTPRCP08575 1304 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 COL6A3P12111 3177 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 hCG_1809904A0A1W2PP81 198 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 A0A1W2PPE2 198 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 A0A1W2PR64 198 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 ERVV-2B6SEH9 535 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 SGK1O00141 431 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 WNT9AO14904 365 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 CLEC3AO75596 197 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 GCNT3O95395 438 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 LPLP06858 475 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 TMEM253P0C7T8 217 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 TMIGD3P0DMS9 266 aaPredicted RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 SLC7A1P30825 629 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 KRT2P35908 639 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 TCF7P36402 384 aaPredicted RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 IL12RB1P42701 662 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 DLG4P78352 724 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 GEN1Q17RS7 908 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 SUPT20HL1Q3ZLR7 823 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 PITRM1Q5JRX3 1037 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 MFSD5Q6N075 450 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 SYNE3Q6ZMZ3 975 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 MARK2Q7KZI7 788 aaKnown RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 ANKRD44Q8N8A2 993 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 FAM71DQ8N9W8 422 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 FANCBQ8NB91 859 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 GMCL1P1Q8NEA9 526 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 CYP2W1Q8TAV3 490 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 KAT5Q92993 513 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 PLVAPQ9BX97 442 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 FTOQ9C0B1 505 aaKnown RBP eCLIP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 CD93Q9NPY3 652 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 GPRC5CQ9NQ84 441 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 TCP11L1Q9NUJ3 509 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 PCDHB1Q9Y5F3 818 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 COL15A1P39059 1388 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 PAPPA2Q9BXP8 1791 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 DCDC2CA8MYV0 355 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 KCNK3O14649 394 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 PHF2O75151 1096 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 TSPAN9O75954 239 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 C22orf31O95567 290 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 FGFR1OPO95684 399 aaKnown RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 FTCDO95954 541 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 TBXAS1P24557 533 aaPredicted RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 BUD31P41223 144 aaPredicted RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 STAT5AP42229 794 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 PUM1Q14671 1186 aaKnown RBP eCLIP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 PREPLQ4J6C6 727 aaPredicted RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 ATG16L1Q676U5 607 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 CCDC62Q6P9F0 684 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 ANGPTL8Q6UXH0 198 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 PLPPR4Q7Z2D5 763 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 HDXQ7Z353 690 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 C12orf40Q86WS4 652 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 KRT73Q86Y46 540 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 MCATQ8IVS2 390 aaKnown RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 DIS3L2Q8IYB7 885 aaKnown RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 IL22RA1Q8N6P7 574 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 KLHL23Q8NBE8 558 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 DENND6BQ8NEG7 585 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 FIBINQ8TAL6 211 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 BAHD1Q8TBE0 780 aaPredicted RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 TSPEARQ8WU66 669 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 TBC1D5Q92609 795 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 KTI12Q96EK9 354 aaPredicted RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 SLC35A4Q96G79 324 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 HHIPL1Q96JK4 782 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 ABHD1Q96SE0 405 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 AGAP2Q99490 1192 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 DPH2Q9BQC3 489 aaPredicted RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 THUMPD3Q9BV44 507 aaKnown RBP6.05□□□□□ -1.44
ERCC4-202ENST00000389138 ABHD16BQ9H3Z7 469 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 DCTPP1Q9H773 170 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 VCPKMTQ9H867 229 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 MSRAQ9UJ68 235 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 TMPRSS11EQ9UL52 423 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms