RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 ZDHHC4Q9NPG8 344 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 CYLDQ9NQC7 956 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 TMEM74BQ9NUR3 256 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 EXOC1Q9NV70 894 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 MARK1Q9P0L2 795 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 PILRBQ9UKJ0 227 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 CFAP45Q9UL16 551 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 ZBTB24O43167 697 aaPredicted RBP18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 CACNG3O60359 315 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 GREM1O60565 184 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 BEST1O76090 585 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 F13A1P00488 732 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 ASS1P00966 412 aaKnown RBP18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 IRF1P10914 325 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 HOXB2P14652 356 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 ENGP17813 658 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 GABRG2P18507 467 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 ATP5C1P36542 298 aaKnown RBP18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 MAP3K7CLP57077 242 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 DLG4P78352 724 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 FOXC1Q12948 553 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 UAP1L1Q3KQV9 507 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 KLHDC10Q6PID8 442 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 UNQ6494/PRO21346Q6UXR6 183 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 SV2AQ7L0J3 742 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 ARMCX6Q7L4S7 300 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 RABEPKQ7Z6M1 372 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 SLC32A1Q9H598 525 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 PNPLA8Q9NP80 782 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 WDR35Q9P2L0 1181 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 SERTAD1Q9UHV2 236 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 LSM7Q9UK45 103 aaKnown RBP18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 SCML2Q9UQR0 700 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 CEP295Q9C0D2 2601 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 MYH10P35580 1976 aa18.89■□□□□ 0.61
RPUSD3-201ENST00000383820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 UPK3BL1B0FP48 263 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 UPK3BL2E5RIL1 263 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 ZNF217O75362 1048 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 NR3C1P04150 777 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 MYL1P05976 194 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 FAM200BP0CF97 657 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 ASPAP45381 313 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 DUOXA1Q1HG43 343 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 FOXD4L5Q5VV16 416 aaPredicted RBP18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 SDE2Q6IQ49 451 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 GRAMD1CQ8IYS0 662 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 FOXD4L4Q8WXT5 416 aaPredicted RBP18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 HNRNPABQ99729 332 aaKnown RBP18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 DNAJC17Q9NVM6 304 aaKnown RBP18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 HMGXB4Q9UGU5 601 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 HCN2Q9UL51 889 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 SLC6A14Q9UN76 642 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 PCDHA5Q9Y5H7 936 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 CEP192Q8TEP8 1941 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 PI4KAP42356 2102 aa18.88■□□□□ 0.61
RPUSD3-201ENST00000383820 A0A1W2PQF6 199 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 MAPK13O15264 365 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 ACTN4O43707 911 aaKnown RBP18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 ITPKAP23677 461 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 PGFP49763 221 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 RPL6Q02878 288 aaKnown RBP18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 INCA1Q0VD86 236 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 KMT5BQ4FZB7 885 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 CLEC20AQ6ZU45 233 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 ASCC3Q8N3C0 2202 aaKnown RBP18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 C12orf29Q8N999 325 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 KDF1Q8NAX2 398 aaPredicted RBP18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 DEFB124Q8NES8 71 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 ELMO3Q96BJ8 720 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 PAGE5Q96GU1 130 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 GABRG3Q99928 467 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 BBS2Q9BXC9 721 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 ADAM33Q9BZ11 813 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 CD248Q9HCU0 757 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 FAM49BQ9NUQ9 324 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 CALCOCO1Q9P1Z2 691 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 USP25Q9UHP3 1055 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 RCOR1Q9UKL0 485 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 FRMD4BQ9Y2L6 1034 aa18.87■□□□□ 0.61
RPUSD3-201ENST00000383820 TMEM8BA6NDV4 472 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 C1QTNF9BB2RNN3 333 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 HHLA1C9JL84 531 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 NEDD8-MDP1E9PL57 170 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 GFRA2O00451 464 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 TRIM24O15164 1050 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 KIF20AO95235 890 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 TBX18O95935 607 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 SERPINF2P08697 491 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 C1QTNF9P0C862 333 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 TYRP14679 529 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 PIK3CAP42336 1068 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 MAPK8P45983 427 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 PSEN1P49768 467 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 SEMA3BQ13214 749 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 ORC1Q13415 861 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 FOXD4L6Q3SYB3 417 aaPredicted RBP18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 EGFLAMQ63HQ2 1017 aa18.86■□□□□ 0.61
RPUSD3-201ENST00000383820 FOXD4L3Q6VB84 417 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms