RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 TBC1D4O60343 1298 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 VNN2O95498 520 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 GLI1P08151 1106 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 KDELR1P24390 212 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 NOS2P35228 1153 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 CETN2P41208 172 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 CDKN2BP42772 138 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 KCNJ1P48048 391 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 USP46P62068 366 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 ROR1Q01973 937 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 MMRN1Q13201 1228 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 GPR17Q13304 367 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 SIX1Q15475 284 aaPredicted RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 CLUL1Q15846 466 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 SLC25A52Q3SY17 297 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 TFDP3Q5H9I0 405 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 PPP6R3Q5H9R7 873 aaPredicted RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 PSRC1Q6PGN9 363 aaPredicted RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 CCDC137Q6PK04 289 aaKnown RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 BHLHA9Q7RTU4 235 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 RNF168Q8IYW5 571 aaPredicted RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 CCDC185Q8N715 623 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 DPF3Q92784 378 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 MAGOHBQ96A72 148 aaKnown RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 C11orf84Q9BUA3 381 aaPredicted RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 SNRNP25Q9BV90 132 aaKnown RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 UBXN6Q9BZV1 441 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 PNPLA8Q9NP80 782 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 TMPRSS4Q9NRS4 437 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 NUDT5Q9UKK9 219 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 STAP1Q9ULZ2 295 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 PLXNA3P51805 1871 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 hCG_1818297A0A087WSY0 165 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 LCHNA4D1U4 455 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 TNFRSF10BO14763 440 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 FSCN2O14926 492 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 PHF2O75151 1096 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 EFEMP2O95967 443 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 GLUD2P49448 558 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 PGFP49763 221 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 CLCN6P51797 869 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 GUCY2DQ02846 1103 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 KLF1Q13351 362 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 MTMR3Q13615 1198 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 KRT81Q14533 505 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 CA9Q16790 459 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 OTUD1Q5VV17 481 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 BSPRYQ5W0U4 402 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 TTC27Q6P3X3 843 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 VSTM1Q6UX27 236 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 ARCQ7LC44 396 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 CCDC105Q8IYK2 499 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 VPS52Q8N1B4 723 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 NUP93Q8N1F7 819 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 FIBCD1Q8N539 461 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 SPPL2BQ8TCT7 592 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 GIPC2Q8TF65 315 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 SLC2A13Q96QE2 648 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 NPY6RQ99463 290 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 DHX35Q9H5Z1 703 aaKnown RBP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 EPB41L5Q9HCM4 733 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 SPG21Q9NZD8 308 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 STIM2Q9P246 746 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 SAE1Q9UBE0 346 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 MTRRQ9UBK8 725 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 R3HDM2Q9Y2K5 976 aaKnown RBP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 PCDHB12Q9Y5F1 795 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 USP3Q9Y6I4 520 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 SLC4A7Q9Y6M7 1214 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 MYO7AQ13402 2215 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 C3orf70A6NLC5 250 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 TLL1O43897 1013 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 URODP06132 367 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 YWHAGP61981 247 aaKnown RBP eCLIP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 DR1Q01658 176 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 DEUP1Q05D60 604 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 TRADDQ15628 312 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 ERMARDQ5T6L9 678 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 BTBD8Q5XKL5 378 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 PM20D1Q6GTS8 502 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 SLC8B1Q6J4K2 584 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 DENND5BQ6ZUT9 1274 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 STRADAQ7RTN6 431 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 RFX6Q8HWS3 928 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 CCDC26Q8TAB7 109 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 PIK3R5Q8WYR1 880 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 CENPIQ92674 756 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 CCDC114Q96M63 670 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 CLSTN3Q9BQT9 956 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 TRIM51Q9BSJ1 452 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 TRIM31Q9BZY9 425 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 FAM204AQ9H8W3 233 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 PIGVQ9NUD9 493 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 ARGLU1Q9NWB6 273 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 DDIT4Q9NX09 232 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 MAGED2Q9UNF1 606 aaPredicted RBP8.34□□□□□ -1.07
ERCC8-202ENST00000381118 AP4E1Q9UPM8 1137 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 INSL6Q9Y581 213 aa8.34□□□□□ -1.07
ERCC8-202ENST00000381118 A0A1W2PQH9 124 aa8.33□□□□□ -1.08
ERCC8-202ENST00000381118 TARSL2A2RTX5 802 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms