RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 ADCY2Q08462 1091 aa20.5■□□□□ 0.87
CCM2-202ENST00000381112 KCTD6Q8NC69 237 aa20.5■□□□□ 0.87
CCM2-202ENST00000381112 MAGOHBQ96A72 148 aaKnown RBP20.5■□□□□ 0.87
CCM2-202ENST00000381112 CRISPLD1Q9H336 500 aa20.5■□□□□ 0.87
CCM2-202ENST00000381112 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.5■□□□□ 0.87
CCM2-202ENST00000381112 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.5■□□□□ 0.877e-6■□□□□ 10.1
CCM2-202ENST00000381112 AMACRQ9UHK6 382 aa20.5■□□□□ 0.87
CCM2-202ENST00000381112 EFR3BQ9Y2G0 817 aa20.5■□□□□ 0.87
CCM2-202ENST00000381112 CAPN9O14815 690 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 CD48P09326 243 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 LINC00271P0C7V0 271 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 SYN1P17600 705 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 SDHAF4Q5VUM1 108 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 BSPRYQ5W0U4 402 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 BEND5Q7L4P6 421 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 DDX53Q86TM3 631 aaKnown RBP20.49■□□□□ 0.87
CCM2-202ENST00000381112 HERVK_113Q902F9 699 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 RUBCNQ92622 972 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 LRRC19Q9H756 370 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 SLC27A5Q9Y2P5 690 aa20.49■□□□□ 0.87
CCM2-202ENST00000381112 WDR27A2RRH5 827 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 MDM4O15151 490 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 ZMYND10O75800 440 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 TJP3O95049 919 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 NCAM1P13591 858 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 RPL17P18621 184 aaKnown RBP20.48■□□□□ 0.87
CCM2-202ENST00000381112 OR1D2P34982 312 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 PPM1AP35813 382 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 GLUD2P49448 558 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 ROR1Q01973 937 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 TTC27Q6P3X3 843 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 MAATS1Q7Z4T9 603 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 NUP93Q8N1F7 819 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 CCDC26Q8TAB7 109 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 CLSTN3Q9BQT9 956 aa20.48■□□□□ 0.87
CCM2-202ENST00000381112 SNRNP25Q9BV90 132 aaKnown RBP20.48■□□□□ 0.87
CCM2-202ENST00000381112 R3HDM2Q9Y2K5 976 aaKnown RBP20.48■□□□□ 0.87
CCM2-202ENST00000381112 M0QYT0 321 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 C2CD2LO14523 706 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 HEXIM1O94992 359 aaKnown RBP20.47■□□□□ 0.87
CCM2-202ENST00000381112 HAPLN1P10915 354 aaPredicted RBP20.47■□□□□ 0.87
CCM2-202ENST00000381112 RDXP35241 583 aaKnown RBP20.47■□□□□ 0.87
CCM2-202ENST00000381112 DUSP4Q13115 394 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 BRD3Q15059 726 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 KAZNQ674X7 775 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 FIBCD1Q8N539 461 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 C1orf54Q8WWF1 131 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 EDEM1Q92611 657 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 TRIM62Q9BVG3 475 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 AAASQ9NRG9 546 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 RRN3Q9NYV6 651 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 IL37Q9NZH6 218 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 PCYOX1Q9UHG3 505 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 SCML2Q9UQR0 700 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 INSL6Q9Y581 213 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 SOAT2O75908 522 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 MCM3P25205 808 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 FNTAP49354 379 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 CDH6P55285 790 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 ZC3H12AQ5D1E8 599 aaKnown RBP20.47■□□□□ 0.87
CCM2-202ENST00000381112 ERMARDQ5T6L9 678 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 HERC6Q8IVU3 1022 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 SLC7A14Q8TBB6 771 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 PGAP3Q96FM1 320 aaPredicted RBP20.47■□□□□ 0.87
CCM2-202ENST00000381112 SPATA17Q96L03 361 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 HINFPQ9BQA5 517 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 ZBED2Q9BTP6 218 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 ARGLU1Q9NWB6 273 aaPredicted RBP20.47■□□□□ 0.87
CCM2-202ENST00000381112 GPATCH2LQ9NWQ4 482 aa20.47■□□□□ 0.87
CCM2-202ENST00000381112 COL4A4P53420 1690 aaPredicted RBP20.47■□□□□ 0.87
CCM2-202ENST00000381112 CCDC151A5D8V7 595 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 COILP38432 576 aaPredicted RBP20.46■□□□□ 0.87
CCM2-202ENST00000381112 YWHAGP61981 247 aaKnown RBP eCLIP20.46■□□□□ 0.87
CCM2-202ENST00000381112 DR1Q01658 176 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 IFRD2Q12894 506 aaPredicted RBP20.46■□□□□ 0.87
CCM2-202ENST00000381112 DHX34Q14147 1143 aaKnown RBP20.46■□□□□ 0.87
CCM2-202ENST00000381112 DPYSL3Q14195 570 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 PDK2Q15119 407 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 MGAT5BQ3V5L5 792 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 SCD5Q86SK9 330 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 FAM131BQ86XD5 332 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 CCDC185Q8N715 623 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 FAM71BQ8TC56 605 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 ATG4AQ8WYN0 398 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 CLP1Q92989 425 aaKnown RBP20.46■□□□□ 0.87
CCM2-202ENST00000381112 SEPT5Q99719 369 aaPredicted RBP20.46■□□□□ 0.87
CCM2-202ENST00000381112 HTATIP2Q9BUP3 242 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 DCLK3Q9C098 648 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 FBXO44Q9H4M3 255 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 PLEKHA4Q9H4M7 779 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 HOMER3Q9NSC5 361 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 PIGVQ9NUD9 493 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 PCDHB12Q9Y5F1 795 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 PTPRSQ13332 1948 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 PATJQ8NI35 1801 aa20.46■□□□□ 0.87
CCM2-202ENST00000381112 BHMG1C9JSJ3 638 aaPredicted RBP20.45■□□□□ 0.86
CCM2-202ENST00000381112 TTI1O43156 1089 aa20.45■□□□□ 0.86
CCM2-202ENST00000381112 PTGIRP43119 386 aa20.45■□□□□ 0.86
CCM2-202ENST00000381112 PGFP49763 221 aa20.45■□□□□ 0.86
CCM2-202ENST00000381112 DEUP1Q05D60 604 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms