RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MROQ9BYG7 248 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 MUC3BQ9H195 1237 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 SMARCAD1Q9H4L7 1026 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 TRIM39Q9HCM9 518 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 UBA2Q9UBT2 640 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ADGRA3Q8IWK6 1321 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 A0A1W2PPW3 197 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 TYW5A2RUC4 315 aaKnown RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 H3BNX3 289 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 MAP3K6O95382 1288 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ALDH1A3P47895 512 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ALDH3B2P48448 385 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ASIC1P78348 528 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 DLG4P78352 724 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 POU6F2P78424 691 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 KDSRQ06136 332 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 TRIM28Q13263 835 aaKnown RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 MDH1BQ5I0G3 518 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 SNAP47Q5SQN1 464 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 PPP4R4Q6NUP7 873 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 KCTD20Q7Z5Y7 419 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 AKAP14Q86UN6 197 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 IGFN1Q86VF2 1251 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 NDUFAF2Q8N183 169 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 RASGEF1CQ8N431 466 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 CATSPER1Q8NEC5 780 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ZFPM2Q8WW38 1151 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 HSPH1Q92598 858 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 TSNARE1Q96NA8 513 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 CITED4Q96RK1 184 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 VPS37BQ9H9H4 285 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 KANSL3Q9P2N6 904 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 ADAMTS1Q9UHI8 967 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 RAB26Q9ULW5 256 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 SCAF8Q9UPN6 1271 aaKnown RBP9.7□□□□□ -0.86
PTPRA-204ENST00000380393 PCDHB4Q9Y5E5 795 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 NUP98P52948 1817 aa9.7□□□□□ -0.86
PTPRA-204ENST00000380393 NUP188Q5SRE5 1749 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 SMIM22K7EJ46 135 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 TTLL1O95922 423 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ICAM2P13598 275 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 PIK3CAP42336 1068 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 GPD2P43304 727 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 CTSWP56202 376 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ECT2LQ008S8 904 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 DNAL1Q4LDG9 190 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 TRMT10CQ7L0Y3 403 aaKnown RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 SETD3Q86TU7 594 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 SGMS1Q86VZ5 419 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ASCC1Q8N9N2 400 aaKnown RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 VTI1AQ96AJ9 217 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 HES6Q96HZ4 224 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 FEM1CQ96JP0 617 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ACAT2Q9BWD1 397 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 HIPK3Q9H422 1215 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 VPS45Q9NRW7 570 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 IL20Q9NYY1 176 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 B3GNT3Q9Y2A9 372 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 AP3M1Q9Y2T2 418 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ATP2A1O14983 1001 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 MSI1O43347 362 aaKnown RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 PEX1O43933 1283 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 NMT2O60551 498 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ATE1O95260 518 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 GYS1P13807 737 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 RRM1P23921 792 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 SLC26A3P40879 764 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 HK2P52789 917 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 DRG2P55039 364 aaKnown RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 PRKCQQ04759 706 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 KLHL30Q0D2K2 578 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 MAPK7Q13164 816 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 DHX34Q14147 1143 aaKnown RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 TMED2Q15363 201 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 USP37Q86T82 979 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 CFAP36Q96G28 342 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 AVENQ9NQS1 362 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 MCM9Q9NXL9 1143 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 NAALADL1Q9UQQ1 740 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 A0A087X0T9 212 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 TRIM64A6NGJ6 449 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 TRIM64BA6NI03 449 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 OR5K4A6NMS3 321 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 FCHO1O14526 889 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ATF6P18850 670 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 BLVRAP53004 296 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 CENPCQ03188 943 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 SLC10A5Q5PT55 438 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 C6orf52Q5T4I8 152 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 CYP20A1Q6UW02 462 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 TTLQ8NG68 377 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 BAP1Q92560 729 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ZNF512Q96ME7 567 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ZNF641Q96N77 438 aaPredicted RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ALPK1Q96QP1 1244 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 TARS2Q9BW92 718 aaKnown RBP9.69□□□□□ -0.86
PTPRA-204ENST00000380393 ATP6V1HQ9UI12 483 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 SERPINA10Q9UK55 444 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 GRID1Q9ULK0 1009 aa9.69□□□□□ -0.86
PTPRA-204ENST00000380393 SOX13Q9UN79 622 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms