RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 DDX23Q9BUQ8 820 aaKnown RBP6.54□□□□□ -1.36
FOCAD-202ENST00000380249 NHEJ1Q9H9Q4 299 aaPredicted RBP6.54□□□□□ -1.36
FOCAD-202ENST00000380249 CLEC1BQ9P126 229 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 LSM7Q9UK45 103 aaKnown RBP6.54□□□□□ -1.36
FOCAD-202ENST00000380249 DAB1O75553 588 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 USP17L7P0C7H9 530 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 CHRNB2P17787 502 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 MATKP42679 507 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 GIMAP7Q8NHV1 300 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 MAFAQ8NHW3 353 aaPredicted RBP6.54□□□□□ -1.36
FOCAD-202ENST00000380249 SLC20A1Q8WUM9 679 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 PGAP3Q96FM1 320 aaPredicted RBP6.54□□□□□ -1.36
FOCAD-202ENST00000380249 CPXM1Q96SM3 734 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 DDX50Q9BQ39 737 aaKnown RBP6.54□□□□□ -1.36
FOCAD-202ENST00000380249 CNPY3Q9BT09 278 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 NACA2Q9H009 215 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 IGFLR1Q9H665 355 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 CNOT8Q9UFF9 292 aaKnown RBP6.54□□□□□ -1.36
FOCAD-202ENST00000380249 SLC12A6Q9UHW9 1150 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 NENFQ9UMX5 172 aa6.54□□□□□ -1.36
FOCAD-202ENST00000380249 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.54□□□□□ -1.36
FOCAD-202ENST00000380249 E5RJQ4 531 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 DPYSL4O14531 572 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 TLR5O60602 858 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 KIAA0754O94854 1291 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 FTLP02792 175 aaPredicted RBP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 CKMP06732 381 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 MMEP08473 750 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 CCDC175P0C221 793 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 MMS22LQ6ZRQ5 1243 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 STRADAQ7RTN6 431 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 CORO1BQ9BR76 489 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 ATXN3LQ9H3M9 355 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 TRAV19A0A0A6YYK7 116 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 BTNL10A8MVZ5 291 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 FSHRP23945 695 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 VAV2P52735 878 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 ADIGQ0VDE8 80 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 BRMS1LQ5PSV4 323 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 TMCO3Q6UWJ1 677 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 UNC45BQ8IWX7 931 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 UBA3Q8TBC4 463 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 ATXN2LQ8WWM7 1075 aaKnown RBP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 ZNF653Q96CK0 615 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 CRISPLD1Q9H336 500 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 PRDM16Q9HAZ2 1276 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 MTA2O94776 668 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 PNMA6AP0CW24 399 aaPredicted RBP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 SKILP12757 684 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 HDCP19113 662 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 HTR7P34969 479 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 BOLA3Q53S33 107 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 RARS2Q5T160 578 aaKnown RBP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 FAM102AQ5T9C2 384 aaPredicted RBP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 SMARCD2Q92925 531 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 PCDHB18PQ96TA0 734 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 EPS15L1Q9UBC2 864 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 E2F8A0AVK6 867 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 CLDN5O00501 218 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 PJA2O43164 708 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 HCRTO43612 131 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 APOEP02649 317 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 KCNA5P22460 613 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 ORC1Q13415 861 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 PPP2R5DQ14738 602 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 MAP9Q49MG5 647 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 OLFML1Q6UWY5 402 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 EP400NLQ6ZTU2 488 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 SND1Q7KZF4 910 aaKnown RBP eCLIP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 MON1BQ7L1V2 547 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.53□□□□□ -1.36
FOCAD-202ENST00000380249 SHKBP1Q8TBC3 707 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 SLC2A13Q96QE2 648 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 SELENOOQ9BVL4 669 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 TSGA10Q9BZW7 698 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 SLITRK6Q9H5Y7 841 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 TMEM30AQ9NV96 361 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 TBX10O75333 385 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 MYL4P12829 197 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 PCK1P35558 622 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 CHKAP35790 457 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 GALCP54803 685 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 ARHGAP29Q52LW3 1261 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 LRRC8AQ8IWT6 810 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 WDTC1Q8N5D0 677 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 FAM161BQ96MY7 647 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 S1PR5Q9H228 398 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 SMOC2Q9H3U7 446 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 ACP6Q9NPH0 428 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 DNMT3LQ9UJW3 386 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 NR2E1Q9Y466 385 aa6.53□□□□□ -1.36
FOCAD-202ENST00000380249 PTPRSQ13332 1948 aa6.52□□□□□ -1.37
FOCAD-202ENST00000380249 RFPL2O75678 378 aa6.52□□□□□ -1.37
FOCAD-202ENST00000380249 OAS1P00973 400 aaKnown RBP6.52□□□□□ -1.37
FOCAD-202ENST00000380249 LRRC38Q5VT99 294 aa6.52□□□□□ -1.37
FOCAD-202ENST00000380249 GAREM2Q75VX8 874 aa6.52□□□□□ -1.37
FOCAD-202ENST00000380249 NT5C3BQ969T7 300 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms