RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 NAALADL1Q9UQQ1 740 aa29.01■■■□□ 2.23
TRAPPC10-202ENST00000380221 MYO7AQ13402 2215 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 PDE2AO00408 941 aaPredicted RBP29■■■□□ 2.23
TRAPPC10-202ENST00000380221 SPOPO43791 374 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 DAB1O75553 588 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 MATKP42679 507 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 DCAF6Q58WW2 860 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 SH3PXD2AQ5TCZ1 1133 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 SYPL2Q5VXT5 272 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 ADGRD2Q7Z7M1 963 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 RBM23Q86U06 439 aaKnown RBP29■■■□□ 2.23
TRAPPC10-202ENST00000380221 NIPA2Q8N8Q9 360 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 GADD45GIP1Q8TAE8 222 aaPredicted RBP29■■■□□ 2.23
TRAPPC10-202ENST00000380221 EDEM1Q92611 657 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 SLC2A13Q96QE2 648 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 LCMT1Q9UIC8 334 aa29■■■□□ 2.23
TRAPPC10-202ENST00000380221 FAM92AA1XBS5 289 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 KCNK3O14649 394 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 SDC4P31431 198 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 YWHAGP61981 247 aaKnown RBP eCLIP28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 TAF10Q12962 218 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 ELF2Q15723 593 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 CDO1Q16878 200 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 TEX35Q5T0J7 233 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 SCD5Q86SK9 330 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 FBXO32Q969P5 355 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 CNPY3Q9BT09 278 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 DDX23Q9BUQ8 820 aaKnown RBP28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 LMAN2LQ9H0V9 348 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 NMUR1Q9HB89 426 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 COMMD8Q9NX08 183 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 GMIPQ9P107 970 aa28.99■■■□□ 2.23
TRAPPC10-202ENST00000380221 COL4A4P53420 1690 aaPredicted RBP28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 A0A1W2PQH9 124 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 DPYSL4O14531 572 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 CAPN9O14815 690 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 C8AP07357 584 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 TFE3P19532 575 aaPredicted RBP28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 SLC1A1P43005 524 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 ATP11AP98196 1134 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 CCDC181Q5TID7 509 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 CES2O00748 559 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 NCAM1P13591 858 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 HMGA1P17096 107 aaKnown RBP28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 MAN1A1P33908 653 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 RAB6CQ53S08 254 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 CC2D1AQ6P1N0 951 aaPredicted RBP28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 CCDC149Q6ZUS6 474 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 ARFGAP1Q8N6T3 406 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 PBKQ96KB5 322 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 TTLL2Q9BWV7 592 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 ADAM33Q9BZ11 813 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 RAB6CQ9H0N0 254 aa28.98■■■□□ 2.23
TRAPPC10-202ENST00000380221 MTCL1Q9Y4B5 1905 aaKnown RBP28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 CSH1P0DML2 217 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 CSH2P0DML3 217 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 TCF4P15884 667 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 EPCAMP16422 314 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 NOS2P35228 1153 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 PAFAH1B1P43034 410 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 EPHB3P54753 998 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 VEPH1Q14D04 833 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 MON1AQ86VX9 555 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 CD101Q93033 1021 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 MS4A14Q96JA4 679 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 RPGRIP1Q96KN7 1286 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 OSER1Q9NX31 292 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 EHD2Q9NZN4 543 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 RNF14Q9UBS8 474 aa28.97■■■□□ 2.23
TRAPPC10-202ENST00000380221 SSR1P43307 286 aaKnown RBP28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 PTPN9P43378 593 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 PITX1P78337 314 aaPredicted RBP28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 SMARCAL1Q9NZC9 954 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 DDX3YO15523 660 aaKnown RBP28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 LRCH4O75427 683 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 TAS2R40P59535 323 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 TAF12Q16514 161 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 BTBD8Q5XKL5 378 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 ZNF572Q7Z3I7 529 aaPredicted RBP28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 DNAJB7Q7Z6W7 309 aaPredicted RBP28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 FAM172AQ8WUF8 416 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 SLC22A17Q8WUG5 538 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 TBCBQ99426 244 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 MAN1C1Q9NR34 630 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 ABCC13Q9NSE7 274 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 CALCOCO1Q9P1Z2 691 aa28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 COLQQ9Y215 455 aaPredicted RBP28.96■■■□□ 2.23
TRAPPC10-202ENST00000380221 LRG1P02750 347 aa28.95■■■□□ 2.22
TRAPPC10-202ENST00000380221 SULT1E1P49888 294 aa28.95■■■□□ 2.22
TRAPPC10-202ENST00000380221 PLD1Q13393 1074 aa28.95■■■□□ 2.22
TRAPPC10-202ENST00000380221 ACAP1Q15027 740 aa28.95■■■□□ 2.22
TRAPPC10-202ENST00000380221 SLC25A52Q3SY17 297 aa28.95■■■□□ 2.22
TRAPPC10-202ENST00000380221 KRT35Q92764 455 aa28.95■■■□□ 2.22
TRAPPC10-202ENST00000380221 PSMG2Q969U7 264 aa28.95■■■□□ 2.22
TRAPPC10-202ENST00000380221 SLITRK1Q96PX8 696 aa28.95■■■□□ 2.22
TRAPPC10-202ENST00000380221 TRANK1O15050 2925 aa28.95■■■□□ 2.22
TRAPPC10-202ENST00000380221 RNF8O76064 485 aa28.94■■■□□ 2.22
TRAPPC10-202ENST00000380221 MARCKSL1P49006 195 aa28.94■■■□□ 2.22
TRAPPC10-202ENST00000380221 TUBB4BP68371 445 aa28.94■■■□□ 2.22
TRAPPC10-202ENST00000380221 NT5C3BQ969T7 300 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms